RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SLC38A8A6NNN8 435 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 TEX46H3BTG2 121 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 CREBL2O60519 120 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 SNAPC5O75971 98 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PGAM2P15259 253 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 AMD1P17707 334 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 CHMP24386 653 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 GRK5P34947 590 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 ZXDBP98169 803 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 TRAM2Q15035 370 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PON3Q15166 354 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 OCLNQ16625 522 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 RANBP10Q6VN20 620 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 SLC24A5Q71RS6 500 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 RIT1Q92963 219 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 C5orf34Q96MH7 638 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 HSPA12BQ96MM6 686 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 SUV39H2Q9H5I1 410 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 MEMO1Q9Y316 297 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PRKYO43930 277 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 STATHP02808 62 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 ATP1B2P14415 290 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 RHCEP18577 417 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 SOX2P48431 317 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 TAS2R43P59537 309 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 C1orf189Q5VU69 101 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 C9orf131Q5VYM1 1079 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 GDPGP1Q6ZNW5 385 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 B3GNT7Q8NFL0 401 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PLD4Q96BZ4 506 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PCYT2Q99447 389 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 MRPS33Q9Y291 106 aaKnown RBP11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 HTR2AP28223 471 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PYCR1P32322 319 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 S100A10P60903 97 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 CXCR4P61073 352 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 MEF2AQ02078 507 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 BTN1A1Q13410 526 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PUM1Q14671 1186 aaKnown RBP eCLIP11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PRAMEF14Q5SWL7 426 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 ADGRF1Q5T601 910 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PRAMEF13Q5VWM6 474 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 KCT2Q8NC54 265 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 OR2L2Q8NH16 312 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 NEK7Q8TDX7 302 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 PCNPQ8WW12 178 aaKnown RBP11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 MAFIPQ8WZ33 124 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 SNX18Q96RF0 628 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 NEUROD4Q9HD90 331 aa11.91□□□□□ -0.5
CSPG4P13-202ENST00000567704 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 PIRO00625 290 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 CDK1P06493 297 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 KELP23276 732 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 SSTR2P30874 369 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 SREBF2Q12772 1141 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 EIF4HQ15056 248 aaKnown RBP11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 ZNF791Q3KP31 576 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 CHST9Q7L1S5 443 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 GPRIN1Q7Z2K8 1008 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 LSMEM2Q8N112 164 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 OR8K3Q8NH51 312 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 PEX13Q92968 403 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 RIOK2Q9BVS4 552 aaKnown RBP11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 MKKSQ9NPJ1 570 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 PCDHB16Q9NRJ7 776 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 GPRC5BQ9NZH0 403 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 UTS2RQ9UKP6 389 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 SEC14L2O76054 403 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 KCNE1P15382 129 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 AHCYP23526 432 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 ARHGAP1Q07960 439 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 AIMP2Q13155 320 aaKnown RBP11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 SP140Q13342 867 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 ARFRP1Q13795 201 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 FUT10Q6P4F1 479 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 IQCF1Q8N6M8 205 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 NATD1Q8N6N6 113 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 SIMC1Q8NDZ2 872 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 OR2S2Q9NQN1 319 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 SOHLH2Q9NX45 425 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 USP54Q70EL1 1684 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 CLDN24A6NM45 220 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 EDIL3O43854 480 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 RBBP9O75884 186 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 TFPIP10646 304 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 HOXD8P13378 290 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 BMP8BP34820 402 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 RAB5BP61020 215 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 RPS26P62854 115 aaKnown RBP11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 PRKCDQ05655 676 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 PLAG1Q6DJT9 500 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 TMIGD1Q6UXZ0 262 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 BMP8AQ7Z5Y6 402 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 ADAMTS16Q8TE57 1224 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 RGMAQ96B86 450 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 COPZ2Q9P299 210 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 OARD1Q9Y530 152 aa11.9□□□□□ -0.5
CSPG4P13-202ENST00000567704 OR6C74A6NCV1 312 aa11.9□□□□□ -0.51
CSPG4P13-202ENST00000567704 SCAMP1O15126 338 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms