RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 PCED1BQ96HM7 432 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 ZNF597Q96LX8 424 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 RAB40CQ96S21 281 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 AGPAT1Q99943 283 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 SOSTQ9BQB4 213 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 TRIM6Q9C030 488 aaPredicted RBP3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 DPEP3Q9H4B8 488 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 AKIRIN1Q9H9L7 192 aaPredicted RBP3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 GPN1Q9HCN4 374 aaPredicted RBP3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 MID1IP1Q9NPA3 183 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 ZNF446Q9NWS9 450 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 PLEK2Q9NYT0 353 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 ITM2BQ9Y287 266 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 CSAG2Q9Y5P2 127 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 TEX264Q9Y6I9 313 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 IGHV3-16A0A0C4DH30 117 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 LOC390937A0A1W2PQ73 354 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CCSO14618 274 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CSO75390 466 aaKnown RBP3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CXCL14O95715 111 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 SEMA4FO95754 770 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 HOXD4P09016 255 aaPredicted RBP3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CT45A8P0DMV1 189 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CT45A9P0DMV2 189 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CAPN2P17655 700 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 ZNF10P21506 573 aaPredicted RBP3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 OAS2P29728 719 aaKnown RBP3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 RPL27P61353 136 aaKnown RBP3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 SRPXP78539 464 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 COX10Q12887 443 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CT45A2Q5DJT8 189 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 FAM182AQ5T1J6 154 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CCDC91Q7Z6B0 441 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 C17orf64Q86WR6 236 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CARNMT1Q8N4J0 409 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CCDC197Q8NCU1 140 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 FAM222BQ8WU58 562 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 UBTD2Q8WUN7 234 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 PNPLA2Q96AD5 504 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 ZNF274Q96GC6 653 aaPredicted RBP3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 RCHY1Q96PM5 261 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 TNFRSF13CQ96RJ3 184 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 ATF6BQ99941 703 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CHCHD5Q9BSY4 110 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 TRIM7Q9C029 511 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 WWP1Q9H0M0 922 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 NAPBQ9H115 298 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 PANK3Q9H999 370 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 KCNK13Q9HB14 408 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 KCNMB3Q9NPA1 279 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 DEPPQ9NTK1 212 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 CYP39A1Q9NYL5 469 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 THYN1Q9P016 225 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 ZNF346Q9UL40 294 aaKnown RBP3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 SPATA2Q9UM82 520 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 ERVK-19Q9WJR5 959 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 NIP7Q9Y221 180 aaKnown RBP eCLIP3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 EXOC6BQ9Y2D4 811 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 MOB4Q9Y3A3 225 aa3.82□□□□□ -1.8
SHCBP1-206ENST00000567698 SHISA9B4DS77 424 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 FBP2O00757 339 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 VEGFDO43915 354 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 TXNDC12O95881 172 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 OLFM2O95897 454 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 ADORA3P0DMS8 318 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 FOLR2P14207 255 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 BCL3P20749 454 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 CAPGP40121 348 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 SLC17A1Q14916 467 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 HEPACAMQ14CZ8 416 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 STX1AQ16623 288 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 IFI44LQ53G44 452 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 C9orf66Q5T8R8 295 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 PLBD1Q6P4A8 553 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 ZNF730Q6ZMV8 503 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 CDHR3Q6ZTQ4 885 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 TIPARPQ7Z3E1 657 aaKnown RBP3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 RNF130Q86XS8 419 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 TBC1D10CQ8IV04 446 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 OR4L1Q8NH43 312 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 ST7LQ8TDW4 575 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 SNX21Q969T3 373 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 NOTCH3Q9UM47 2321 aa3.81□□□□□ -1.8
SHCBP1-206ENST00000567698 FGD5Q6ZNL6 1462 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 HCFC1P51610 2035 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 TRGV8A0A0C4DH27 118 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 ACOD1A6NK06 481 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 HMOX1P09601 288 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 CCDC159P0C7I6 412 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 LMO2P25791 158 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 OXTRP30559 389 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 MTIF2P46199 727 aaKnown RBP3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 DSCR10P59022 87 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 WDR25Q64LD2 544 aaPredicted RBP3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 ZNF410Q86VK4 478 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 UNC45BQ8IWX7 931 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 FBXW8Q8N3Y1 598 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 OR1B1Q8NGR6 318 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 GANCQ8TET4 914 aa3.8□□□□□ -1.8
SHCBP1-206ENST00000567698 GLYATL1Q969I3 302 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms