RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 RBM18Q96H35 190 aaKnown RBP17.28■□□□□ 0.36
LINC01238-205ENST00000567549 DGAT2Q96PD7 388 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 F2RL3Q96RI0 385 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 MS4A8Q9BY19 250 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 ENKD1Q9H0I2 346 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 DPH5Q9H2P9 285 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 PRDM7Q9NQW5 492 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 PCDHGA11Q9Y5H2 935 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 K7EPI3 171 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 KERAO60938 352 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 WISP2O76076 250 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 SCELO95171 688 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 CNR1P21554 472 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 ATP5A1P25705 553 aaKnown RBP17.27■□□□□ 0.36
LINC01238-205ENST00000567549 BUD31P41223 144 aaPredicted RBP17.27■□□□□ 0.36
LINC01238-205ENST00000567549 PIK3CGP48736 1102 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 RNF4P78317 190 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 CKAP4Q07065 602 aaKnown RBP17.27■□□□□ 0.36
LINC01238-205ENST00000567549 PCDH1Q08174 1060 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 E2F2Q14209 437 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 OR4D1Q15615 310 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 FAM83EQ2M2I3 478 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 MPEG1Q2M385 716 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 MEX3BQ6ZN04 569 aaKnown RBP17.27■□□□□ 0.36
LINC01238-205ENST00000567549 LAS2Q8IYD9 372 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 FAM109AQ8N4B1 249 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 SPATA6LQ8N4H0 392 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 SLC15A4Q8N697 577 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 OR5M3Q8NGP4 307 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 SLC2A12Q8TD20 617 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 UBTD2Q8WUN7 234 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 TANKQ92844 425 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 RGMAQ96B86 450 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 ALG9Q9H6U8 611 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 WDR41Q9HAD4 459 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 IL1RL2Q9HB29 575 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 KCNJ16Q9NPI9 418 aa17.27■□□□□ 0.36
LINC01238-205ENST00000567549 ZNF223Q9UK11 482 aaPredicted RBP17.27■□□□□ 0.36
LINC01238-205ENST00000567549 ZNF490Q9ULM2 529 aaPredicted RBP17.27■□□□□ 0.36
LINC01238-205ENST00000567549 WWP2O00308 870 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 HOXD4P09016 255 aaPredicted RBP17.26■□□□□ 0.35
LINC01238-205ENST00000567549 RFC3P40938 356 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 SOX3P41225 446 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 PIK3CBP42338 1070 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 HNRNPFP52597 415 aaKnown RBP17.26■□□□□ 0.35
LINC01238-205ENST00000567549 HK2P52789 917 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 KHDRBS2Q5VWX1 349 aaKnown RBP17.26■□□□□ 0.35
LINC01238-205ENST00000567549 C3P1Q6ZMU1 363 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 CEP128Q6ZU80 1094 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 FAM47EQ6ZV65 393 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 VN1R5Q7Z5H4 357 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 CHERPQ8IWX8 916 aaKnown RBP17.26■□□□□ 0.35
LINC01238-205ENST00000567549 PPM1NQ8N819 430 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 SPATA4Q8NEY3 305 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 NUBPLQ8TB37 319 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 ZNF473Q8WTR7 871 aaKnown RBP17.26■□□□□ 0.35
LINC01238-205ENST00000567549 PTPMT1Q8WUK0 201 aaPredicted RBP17.26■□□□□ 0.35
LINC01238-205ENST00000567549 CSF3RQ99062 836 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 ZDHHC11Q9H8X9 412 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 MCCC2Q9HCC0 563 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 SMYD2Q9NRG4 433 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 ACOT9Q9Y305 439 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 CLDN16Q9Y5I7 305 aa17.26■□□□□ 0.35
LINC01238-205ENST00000567549 A0A087X1B8 175 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 UQCRHLA0A096LP55 91 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 CXorf49A8MYA2 514 aaPredicted RBP17.25■□□□□ 0.35
LINC01238-205ENST00000567549 ADAM10O14672 748 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 CTIFO43310 598 aaKnown RBP17.25■□□□□ 0.35
LINC01238-205ENST00000567549 UGDHO60701 494 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 LDB3O75112 727 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 OR6B1O95007 311 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 STT3AP46977 705 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 TLE4Q04727 773 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 LIPJQ5W064 366 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 OR4C11Q6IEV9 310 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 GRHL2Q6ISB3 625 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 METTL2BQ6P1Q9 378 aaKnown RBP17.25■□□□□ 0.35
LINC01238-205ENST00000567549 MYLK4Q86YV6 388 aaPredicted RBP17.25■□□□□ 0.35
LINC01238-205ENST00000567549 CLYBLQ8N0X4 340 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 TMEM52Q8NDY8 209 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 OR7G3Q8NG95 312 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 LILRB4Q8NHJ6 448 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 RHEBL1Q8TAI7 183 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 ESAMQ96AP7 390 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 SARAFQ96BY9 339 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 TTTY12Q9BZ98 90 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 DEFB127Q9H1M4 99 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 LDAHQ9H6V9 325 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 RPF2Q9H7B2 306 aaKnown RBP17.25■□□□□ 0.35
LINC01238-205ENST00000567549 LYARQ9NX58 379 aaKnown RBP17.25■□□□□ 0.35
LINC01238-205ENST00000567549 BOKQ9UMX3 212 aaPredicted RBP17.25■□□□□ 0.35
LINC01238-205ENST00000567549 TSC22D4Q9Y3Q8 395 aa17.25■□□□□ 0.35
LINC01238-205ENST00000567549 TNPO3Q9Y5L0 923 aaKnown RBP17.25■□□□□ 0.35
LINC01238-205ENST00000567549 CAPN14A8MX76 684 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 TGFBR3LH3BV60 316 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 SUSD5O60279 629 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 WDR1O75083 606 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 PDE9AO76083 593 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 CD22P20273 847 aa17.24■□□□□ 0.35
LINC01238-205ENST00000567549 PTX3P26022 381 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms