RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TNPO3Q9Y5L0 923 aaKnown RBP13.63□□□□□ -0.23
FANCA-220ENST00000566409 TRGV8A0A0C4DH27 118 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 A0A1B0GTL3 188 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 TRIM49D1C9J1S8 452 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 NPIPA5E9PKD4 350 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 FCHO1O14526 889 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 FGF17O60258 216 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 UGDHO60701 494 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 ZNF354AO60765 605 aaPredicted RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 EEDO75530 441 aaKnown RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 PRKRAO75569 313 aaKnown RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 OR2J2O76002 312 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 ZFAND5O76080 213 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 TUBB4AP04350 444 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 RBP1P09455 135 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 CPN2P22792 545 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 BSGP35613 385 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 DCTP40126 519 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 CA7P43166 264 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 SERPINB9P50453 376 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 IGLV3-21P80748 117 aaPredicted RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 ALDH6A1Q02252 535 aaKnown RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 FAM219BQ5XKK7 198 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 METTL2BQ6P1Q9 378 aaKnown RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 DGAT2L6Q6ZPD8 337 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 RPS27LQ71UM5 84 aaKnown RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 SULF2Q8IWU5 870 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 ZCCHC7Q8N3Z6 543 aaKnown RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 UCN3Q969E3 161 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 OR8D2Q9GZM6 311 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 NOL11Q9H8H0 719 aaKnown RBP13.62□□□□□ -0.23
FANCA-220ENST00000566409 XPR1Q9UBH6 696 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 PCTPQ9UKL6 214 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 NPIPA1Q9UND3 350 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 ZNF835Q9Y2P0 537 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 ASB4Q9Y574 426 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 CLCA3PQ9Y6N3 262 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 DCHS2Q6V1P9 2916 aa13.62□□□□□ -0.23
FANCA-220ENST00000566409 MYO9AB2RTY4 2548 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 A0A087WUV0 522 aaPredicted RBP13.61□□□□□ -0.23
FANCA-220ENST00000566409 C17orf105B2RV13 164 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 HRKO00198 91 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 WWP2O00308 870 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 PPP6CO00743 305 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 PROM1O43490 865 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 ASNA1O43681 348 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 TMPRSS11DO60235 418 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 SLC19A2O60779 497 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 KRT38O76015 456 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 FAM153BP0C7A2 387 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 COL6A2P12110 1019 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 PTX3P26022 381 aaPredicted RBP13.61□□□□□ -0.23
FANCA-220ENST00000566409 PER3P56645 1201 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 TRAF3Q13114 568 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 SERTAD2Q14140 314 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 C3AR1Q16581 482 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 FAM153CQ494X1 144 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 KRTCAP3Q53RY4 240 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 MRM1Q6IN84 353 aaKnown RBP13.61□□□□□ -0.23
FANCA-220ENST00000566409 FGD2Q7Z6J4 655 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 GPR180Q86V85 440 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 CYP4Z2PQ8N1L4 340 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 MORN4Q8NDC4 146 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 OR14A16Q8NHC5 309 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 KIF18AQ8NI77 898 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 SLC2A12Q8TD20 617 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 ZNF721Q8TF20 911 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 DAZLQ92904 295 aaKnown RBP13.61□□□□□ -0.23
FANCA-220ENST00000566409 CCDC120Q96HB5 630 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 RPF2Q9H7B2 306 aaKnown RBP13.61□□□□□ -0.23
FANCA-220ENST00000566409 DDX31Q9H8H2 851 aaKnown RBP13.61□□□□□ -0.23
FANCA-220ENST00000566409 PSD3Q9NYI0 1048 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 MYOTQ9UBF9 498 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 YARS2Q9Y2Z4 477 aaKnown RBP13.61□□□□□ -0.23
FANCA-220ENST00000566409 IKBKGQ9Y6K9 419 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 TACC2O95359 2948 aa13.61□□□□□ -0.23
FANCA-220ENST00000566409 CACNA1CQ13936 2221 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 PKDREJQ9NTG1 2253 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 A0A0A6YYD5 115 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 A0A1W2PR48 441 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 STX16-NPEPL1H3BU86 382 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 KIF2AO00139 706 aaPredicted RBP13.6□□□□□ -0.23
FANCA-220ENST00000566409 FOXE1O00358 373 aaPredicted RBP13.6□□□□□ -0.23
FANCA-220ENST00000566409 CCL21O00585 134 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 STX16O14662 325 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 OR6B1O95007 311 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 CLDN9O95484 217 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 TNNI3P19429 210 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 RFC3P40938 356 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 STT3AP46977 705 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 MEOX1P50221 254 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 SSR4P51571 173 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 NR0B1P51843 470 aaKnown RBP13.6□□□□□ -0.23
FANCA-220ENST00000566409 RAP1GDS1P52306 607 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 HK2P52789 917 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 ARFIP1P53367 373 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 RNF4P78317 190 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 HSF1Q00613 529 aa13.6□□□□□ -0.23
FANCA-220ENST00000566409 TNFRSF17Q02223 184 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms