RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 Q71RC1 249 aaPredicted RBP1.36□□□□□ -2.19
SMG1-212ENST00000566328 NUFIP2Q7Z417 695 aaKnown RBP1.36□□□□□ -2.19
SMG1-212ENST00000566328 TBC1D10CQ8IV04 446 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 FBXO16Q8IX29 292 aaPredicted RBP1.36□□□□□ -2.19
SMG1-212ENST00000566328 TEX26Q8N6G2 289 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 CCDC63Q8NA47 563 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 EXOC4Q96A65 974 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 FAF2Q96CS3 445 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 FAM120BQ96EK7 910 aaKnown RBP1.36□□□□□ -2.19
SMG1-212ENST00000566328 IMMP1LQ96LU5 166 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 RCHY1Q96PM5 261 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 PCDHB18PQ96TA0 734 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 NDNQ99608 321 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 THUMPD2Q9BTF0 503 aaKnown RBP1.36□□□□□ -2.19
SMG1-212ENST00000566328 PINK1Q9BXM7 581 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 TRPM3Q9HCF6 1732 aaPredicted RBP1.36□□□□□ -2.19
SMG1-212ENST00000566328 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.36□□□□□ -2.19
SMG1-212ENST00000566328 IFT172Q9UG01 1749 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 UBQLN2Q9UHD9 624 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 ZNF215Q9UL58 517 aaPredicted RBP1.36□□□□□ -2.19
SMG1-212ENST00000566328 NIP7Q9Y221 180 aaKnown RBP eCLIP1.36□□□□□ -2.19
SMG1-212ENST00000566328 USP16Q9Y5T5 823 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 COL18A1P39060 1754 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 CDK12Q9NYV4 1490 aaPredicted RBP1.36□□□□□ -2.19
SMG1-212ENST00000566328 GAKO14976 1311 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 KIF7Q2M1P5 1343 aa1.36□□□□□ -2.19
SMG1-212ENST00000566328 MAP2P11137 1827 aaKnown RBP1.36□□□□□ -2.19
SMG1-212ENST00000566328 CPDO75976 1380 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 USP47Q96K76 1375 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 ARHGEF28Q8N1W1 1705 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 MARF1Q9Y4F3 1742 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 ANKARQ7Z5J8 1434 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 LOC390937A0A1W2PQ73 354 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 FRG2CA6NGY1 282 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 ZFP92A6NM28 416 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 CCT8L1PA6NM43 557 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 TRIM77I1YAP6 450 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 CLDN4O14493 209 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 TPD52L2O43399 206 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 DFNA5O60443 496 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 PTP4A3O75365 173 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 EIF3JO75822 258 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 MMP10P09238 476 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 CPN1P15169 458 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 PGAM2P15259 253 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 GOT1P17174 413 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 HSD17B3P37058 310 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 NAP1L1P55209 391 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 BTG1P62324 171 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 POLR2LP62875 67 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 EBI3Q14213 229 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 PTPRCAPQ14761 206 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 PCLAFQ15004 111 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 GPR157Q5UAW9 335 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 NAA16Q6N069 864 aaPredicted RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 TTC27Q6P3X3 843 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 FUT10Q6P4F1 479 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 SLC22A18ASQ8N1D0 253 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 OR6F1Q8NGZ6 308 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 TBCKQ8TEA7 893 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 AFAP1L1Q8TED9 768 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 GANCQ8TET4 914 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 PRPF31Q8WWY3 499 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 SEPT1Q8WYJ6 367 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 HDAC2Q92769 488 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 JAKMIP2Q96AA8 810 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 FAM122AQ96E09 287 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 CCT8L2Q96SF2 557 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 GOLPH3LQ9H4A5 285 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 FNDC4Q9H6D8 234 aaPredicted RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 PLEKHA3Q9HB20 300 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 NMUR1Q9HB89 426 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 DNAJC4Q9NNZ3 241 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 TMOD3Q9NYL9 352 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 TBC1D7Q9P0N9 293 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 PPIEQ9UNP9 301 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 KNSTRNQ9Y448 316 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 HBS1LQ9Y450 684 aaKnown RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 COL22A1Q8NFW1 1626 aaPredicted RBP1.35□□□□□ -2.19
SMG1-212ENST00000566328 SBF2Q86WG5 1849 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 PLCH1Q4KWH8 1693 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 ALS2Q96Q42 1657 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 TTC21AQ8NDW8 1320 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 MEGF6O75095 1541 aa1.35□□□□□ -2.19
SMG1-212ENST00000566328 NSD2O96028 1365 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 CDC42BPGQ6DT37 1551 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 COL14A1Q05707 1796 aaKnown RBP1.34□□□□□ -2.19
SMG1-212ENST00000566328 DISP2A7MBM2 1401 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 NSD3Q9BZ95 1437 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 LAMC1P11047 1609 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 PHRF1Q9P1Y6 1649 aaKnown RBP1.34□□□□□ -2.19
SMG1-212ENST00000566328 EYSQ5T1H1 3165 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 SZT2Q5T011 3432 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 J3KRW8 73 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 FRAT2O75474 233 aaPredicted RBP1.34□□□□□ -2.19
SMG1-212ENST00000566328 CA11O75493 328 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 TSPAN9O75954 239 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 MBD4O95243 580 aa1.34□□□□□ -2.19
SMG1-212ENST00000566328 WISP3O95389 354 aaPredicted RBP1.34□□□□□ -2.19
SMG1-212ENST00000566328 ATP5BP06576 529 aaKnown RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms