RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 A8MT66 165 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 CYR61O00622 381 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 LRRTM2O43300 516 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 WISP2O76076 250 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 UNC5CO95185 931 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 CRYABP02511 175 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 KRT4P19013 534 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 TSPAN8P19075 237 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 HIST1H1TP22492 207 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 MST1P26927 711 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 CCNG1P51959 295 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 PHEXP78562 749 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 ZNF844Q08AG5 666 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 SLAMF1Q13291 335 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 INAQ16352 499 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 KHDRBS2Q5VWX1 349 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 C16orf47Q6ZP98 133 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 TRABD2AQ86V40 505 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 FJX1Q86VR8 437 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 MDS2Q8NDY4 140 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 DOK4Q8TEW6 326 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 NSUN5Q96P11 429 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 C1QTNF3Q9BXJ4 246 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 ALOXE3Q9BYJ1 711 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 ADAP2Q9NPF8 381 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 DMRT3Q9NQL9 472 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 PLEKHB1Q9UF11 243 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 EMCNQ9ULC0 261 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 CLDN16Q9Y5I7 305 aa12.72□□□□□ -0.37
VPS9D1-204ENST00000565023 PRRC2CQ9Y520 2896 aaKnown RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 MYO7BQ6PIF6 2116 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 FCHO1O14526 889 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 PRKNO60260 465 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 DLX3O60479 287 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 CTNSO60931 367 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 ERLIN1O75477 346 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 PRKRAO75569 313 aaKnown RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 RPS17P08708 135 aaKnown RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 TAC1P20366 129 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 COL8A1P27658 744 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 CCT5P48643 541 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 TDGF1P3P51864 188 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 MLF1P58340 268 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 ZRSR2Q15696 482 aaKnown RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 TMEM35AQ53FP2 167 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 SGO1Q5FBB7 561 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 DEPDC1Q5TB30 811 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 LIPJQ5W064 366 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 FAM219BQ5XKK7 198 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 ZNF324BQ6AW86 544 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 TTC19Q6DKK2 380 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 OR4C11Q6IEV9 310 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 SLC25A25Q6KCM7 469 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 TMEM178AQ8NBL3 297 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 APCDD1LQ8NCL9 501 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 OR52B6Q8NGF0 335 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 RGMAQ96B86 450 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 VMP1Q96GC9 406 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 CENPKQ9BS16 269 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 OR8D2Q9GZM6 311 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 LYRM4Q9HD34 91 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 SEMA4BQ9NPR2 832 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 MKS1Q9NXB0 559 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 KCMF1Q9P0J7 381 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 SEC14L3Q9UDX4 400 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 ZNF223Q9UK11 482 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 PCTPQ9UKL6 214 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 GRID1Q9ULK0 1009 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 PCDHGA11Q9Y5H2 935 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 CLCA3PQ9Y6N3 262 aa12.71□□□□□ -0.37
VPS9D1-204ENST00000565023 EML6Q6ZMW3 1958 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 TRGV8A0A0C4DH27 118 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 ARHGAP10A1A4S6 786 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 PLPP1O14494 284 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 COPEO14579 308 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 OR7A17O14581 309 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 PLIN3O60664 434 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 UGDHO60701 494 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 SLC25A12O75746 678 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 NEURL1O76050 574 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 CLDN9O95484 217 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 ETHE1O95571 254 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 LDLRP01130 860 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 GBAP04062 536 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 PROCP04070 461 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 SP1P08047 785 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 ATP5F1P24539 256 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 SERPINB1P30740 379 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 CYB561P49447 251 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 HNRNPH2P55795 449 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 ALDH6A1Q02252 535 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 ELAVL1Q15717 326 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 CCDC153Q494R4 210 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 C4orf17Q53FE4 359 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 BEND6Q5SZJ8 279 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 C18orf63Q68DL7 685 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 C4orf33Q8N1A6 199 aa12.7□□□□□ -0.38
VPS9D1-204ENST00000565023 TMEM132CQ8N3T6 1108 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms