RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ATP6V1HQ9UI12 483 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 PHF11Q9UIL8 331 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 FBXW2Q9UKT8 454 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 RARRES3Q9UL19 164 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 NDUFAF1Q9Y375 327 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 ASB4Q9Y574 426 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 COL27A1Q8IZC6 1860 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-205ENST00000564899 UNC13CQ8NB66 2214 aa10.48□□□□□ -0.73
SF3B3-205ENST00000564899 A0A1W2PNU3 283 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 A0A1W2PP18 115 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 A0A1W2PR48 441 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 PMS2P1A4D2B8 440 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 GABRR3A8MPY1 467 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 TMX2-CTNND1H3BSU7 103 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 SGK494L7N484 410 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 MRASO14807 208 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 AIM2O14862 343 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 ZNF749O43361 778 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 FOXS1O43638 330 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 NSA2O95478 260 aaKnown RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 AIFM1O95831 613 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 PGRP06401 933 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 NR2F6P10588 404 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 PIM1P11309 404 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 DRD2P14416 443 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 DDX5P17844 614 aaKnown RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 CPN2P22792 545 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 BUD31P41223 144 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 KIR3DL1P43629 444 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 NUDT2P50583 147 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 LIM2P55344 173 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 SRSF1Q07955 248 aaKnown RBP eCLIP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 PDE7AQ13946 482 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 RUNX2Q13950 521 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 COQ5Q5HYK3 327 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 CPTPQ5TA50 214 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 NDUFAF5Q5TEU4 345 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 YOD1Q5VVQ6 348 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 CDCP2Q5VXM1 449 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 CYB5D1Q6P9G0 228 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 CAMKMTQ7Z624 323 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 GPR180Q86V85 440 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 TICAM1Q8IUC6 712 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 MMP21Q8N119 569 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 DTWD1Q8N5C7 304 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 METTL27Q8N6F8 245 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 OR5T3Q8NGG3 340 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 MTERF3Q96E29 417 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 NPLQ9BXD5 320 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 STRADBQ9C0K7 418 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 LYRM4Q9HD34 91 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 SLC52A3Q9NQ40 469 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 ATAD3AQ9NVI7 634 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 OCIAD1Q9NX40 245 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 SH3BP4Q9P0V3 963 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 NDOR1Q9UHB4 597 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 LEF1Q9UJU2 399 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 DAPP1Q9UN19 280 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 SRPK3Q9UPE1 567 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 EXO1Q9UQ84 846 aaKnown RBP10.47□□□□□ -0.73
SF3B3-205ENST00000564899 ATG4BQ9Y4P1 393 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 SPACA6W5XKT8 324 aa10.47□□□□□ -0.73
SF3B3-205ENST00000564899 C1orf226A1L170 272 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 ASPDHA6ND91 283 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 B2RBV5 119 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 B8ZZF3 427 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 FBP2O00757 339 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 DNAJB6O75190 326 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 PRKRAO75569 313 aaKnown RBP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 MT-CO3P00414 261 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 LAMP1P11279 417 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 CDK4P11802 303 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 TLX1P31314 330 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 GCGRP47871 477 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 RASSF2P50749 326 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 ARSFP54793 590 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 RAB38P57729 211 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 NCALDP61601 193 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 TNFRSF17Q02223 184 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 ART3Q13508 389 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 TLR1Q15399 786 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 ISXQ2M1V0 245 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 ZNF385BQ569K4 471 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 PRAMEF17Q5VTA0 474 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 C18orf63Q68DL7 685 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 OR4F3Q6IEY1 312 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 SLC2A7Q6PXP3 512 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 RINLQ6ZS11 566 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 MSANTD1Q6ZTZ1 278 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 TTLL10Q6ZVT0 673 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 BPHLQ86WA6 291 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 PPP1R3BQ86XI6 285 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 TMEM126BQ8IUX1 230 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 CA13Q8N1Q1 262 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 PCYOX1LQ8NBM8 494 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 RBM15BQ8NDT2 890 aaKnown RBP10.46□□□□□ -0.73
SF3B3-205ENST00000564899 OR8J2Q8NGG1 315 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 COQ8BQ96D53 544 aa10.46□□□□□ -0.73
SF3B3-205ENST00000564899 MVB12AQ96EY5 273 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms