RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 A0A1W2PR48 441 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 TCRBV16S1A1N1A0A5B0 115 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 A8MUA0 341 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 PCDH7O60245 1069 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 LDB3O75112 727 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 RSL1D1O76021 490 aaKnown RBP14.99□□□□□ -0.01
RAB40C-208ENST00000564703 ALPPP05187 535 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 SERPINA7P05543 415 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 NR2F6P10588 404 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 RPL14P50914 215 aaKnown RBP14.99□□□□□ -0.01
RAB40C-208ENST00000564703 TNFRSF17Q02223 184 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 LY6DQ14210 128 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 PCOLCEQ15113 449 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 BTBD16Q32M84 506 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 HSP90B2PQ58FF3 399 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 TTMPQ5BVD1 217 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 PAPD4Q6PIY7 484 aaKnown RBP14.99□□□□□ -0.01
RAB40C-208ENST00000564703 RIPOR1Q6ZS17 1223 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 SCUBE1Q8IWY4 988 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 EXD3Q8N9H8 876 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 TMEM52Q8NDY8 209 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 C9orf43Q8TAL5 461 aaPredicted RBP14.99□□□□□ -0.01
RAB40C-208ENST00000564703 TWIST2Q8WVJ9 160 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 APIPQ96GX9 242 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 RBM18Q96H35 190 aaKnown RBP14.99□□□□□ -0.01
RAB40C-208ENST00000564703 METTL2AQ96IZ6 378 aaKnown RBP14.99□□□□□ -0.01
RAB40C-208ENST00000564703 MESP1Q9BRJ9 268 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 MANSC1Q9H8J5 431 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 RAP2CQ9Y3L5 183 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 PCDHGA9Q9Y5G4 932 aaKnown RBP14.99□□□□□ -0.01
RAB40C-208ENST00000564703 CLCA3PQ9Y6N3 262 aa14.99□□□□□ -0.01
RAB40C-208ENST00000564703 IGKV3D-11A0A0A0MRZ8 115 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 MASP2O00187 686 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 ITM2AO43736 263 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 DYRK3O43781 588 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 LYPLA1O75608 230 aaPredicted RBP14.98□□□□□ -0.01
RAB40C-208ENST00000564703 SASH3O75995 380 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 ANXA4P09525 319 aaPredicted RBP14.98□□□□□ -0.01
RAB40C-208ENST00000564703 COX7A2P14406 83 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 PIK3R1P27986 724 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 PGDP52209 483 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 HNRNPFP52597 415 aaKnown RBP14.98□□□□□ -0.01
RAB40C-208ENST00000564703 EFNA3P52797 238 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 MYBPC3Q14896 1274 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 NR6A1Q15406 480 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 UGT3A2Q3SY77 523 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 NDUFAF5Q5TEU4 345 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 AGAP7PQ5VUJ5 663 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 FAM219BQ5XKK7 198 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 TCTN3Q6NUS6 607 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 JMJD6Q6NYC1 403 aaPredicted RBP14.98□□□□□ -0.01
RAB40C-208ENST00000564703 RNF165Q6ZSG1 346 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 TMEM132CQ8N3T6 1108 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 FDCSPQ8NFU4 85 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 FAM76AQ8TAV0 307 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 RAB3IL1Q8TBN0 382 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 M1APQ8TC57 530 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 DYDC1Q8WWB3 177 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 SLC39A7Q92504 469 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 IMMP1LQ96LU5 166 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 AGAP4Q96P64 663 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 SLC25A18Q9H1K4 315 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 LRTM1Q9HBL6 345 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 THAP1Q9NVV9 213 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 C1orf109Q9NX04 203 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 ZNF451Q9Y4E5 1061 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 PCDHGB7Q9Y5F8 929 aa14.98□□□□□ -0.01
RAB40C-208ENST00000564703 KMT2BQ9UMN6 2715 aaPredicted RBP14.98□□□□□ -0.01
RAB40C-208ENST00000564703 NUP210LQ5VU65 1888 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 C1orf226A1L170 272 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 GLOD5A6NK44 160 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 TMEM233B4DJY2 109 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 CEACAM4O75871 244 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 GPR75O95800 540 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 AIFM1O95831 613 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 PRR35P0CG20 571 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 TIA1P31483 386 aaKnown RBP eCLIP14.97□□□□□ -0.01
RAB40C-208ENST00000564703 GSTM5P46439 218 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 ALDH9A1P49189 494 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 PPP2R2AP63151 447 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 ID2Q02363 134 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 BST1Q10588 318 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 RAPSNQ13702 412 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 HEPACAMQ14CZ8 416 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 PLAG1Q6DJT9 500 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 OR52E8Q6IFG1 317 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 GALNT18Q6P9A2 607 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 OR4N5Q8IXE1 308 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 OR4K14Q8NGD5 310 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 TM9SF4Q92544 642 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 DAZLQ92904 295 aaKnown RBP14.97□□□□□ -0.01
RAB40C-208ENST00000564703 ANKRD9Q96BM1 317 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-208ENST00000564703 TM4SF18Q96CE8 201 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 PPP3R2Q96LZ3 170 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 DGAT2Q96PD7 388 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 PELOQ9BRX2 385 aaKnown RBP14.97□□□□□ -0.01
RAB40C-208ENST00000564703 ZNF395Q9H8N7 513 aaPredicted RBP14.97□□□□□ -0.01
RAB40C-208ENST00000564703 KCNK13Q9HB14 408 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 ADAP2Q9NPF8 381 aa14.97□□□□□ -0.01
RAB40C-208ENST00000564703 ZNF71Q9NQZ8 489 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms