RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ACOT7O00154 380 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 ADAM10O14672 748 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 SUPT3HO75486 399 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 CPN2P22792 545 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 PTGER1P34995 402 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 PIK3CGP48736 1102 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 RNF4P78317 190 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 PHEXP78562 749 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 IGLV3-21P80748 117 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 SLAMF1Q13291 335 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 SLMAPQ14BN4 828 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 CMPK2Q5EBM0 449 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 FBXO48Q5FWF7 155 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 GRHL2Q6ISB3 625 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 IL20RBQ6UXL0 311 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 ZNF793Q6ZN11 406 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 RTL4Q6ZR62 310 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 GK5Q6ZS86 529 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 ZNF572Q7Z3I7 529 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 FGD2Q7Z6J4 655 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 SLC22A16Q86VW1 577 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 DND1Q8IYX4 353 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 SLC15A4Q8N697 577 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 NUBPLQ8TB37 319 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 CA5BP1Q8WTZ4 195 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 ASB5Q8WWX0 329 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 ANKRD9Q96BM1 317 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 ART5Q96L15 291 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 RASL10BQ96S79 203 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 CSF3RQ99062 836 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 OR8D2Q9GZM6 311 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 TSPYL1Q9H0U9 437 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 TP63Q9H3D4 680 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 PRM3Q9NNZ6 103 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 IGSF5Q9NSI5 407 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■■■■■ 29.4
GTF3C1-204ENST00000564664 COPS7AQ9UBW8 275 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 PHF11Q9UIL8 331 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 ANGPTL3Q9Y5C1 460 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 OR14I1A6ND48 311 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 H0YIV9 168 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 UBXN8O00124 270 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 HS6ST1O60243 411 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 PRKNO60260 465 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 FAM155BO75949 473 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 TGFB1P01137 390 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 PCNAP12004 261 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 MTHFD2P13995 350 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 CAPN3P20807 821 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 GALNSP34059 522 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 SSR2P43308 183 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 STT3AP46977 705 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 HK2P52789 917 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 ALDH18A1P54886 795 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 PPIAP62937 165 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 HSF1Q00613 529 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 C2orf54Q08AI8 447 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 DLG1Q12959 904 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 SETDB1Q15047 1291 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 HYAL4Q2M3T9 481 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 PIGGQ5H8A4 983 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 C10orf62Q5T681 223 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 ADNP2Q6IQ32 1131 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 KLC3Q6P597 504 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 CMC1Q7Z7K0 106 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 GPR180Q86V85 440 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 CCDC25Q86WR0 208 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 ZCCHC7Q8N3Z6 543 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 TEX9Q8N6V9 391 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 ACBD4Q8NC06 268 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 OR2M7Q8NG81 312 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 OR52N2Q8NGI0 321 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 HUS1BQ8NHY5 278 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 SLC2A12Q8TD20 617 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 NXNL1Q96CM4 212 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 SENP5Q96HI0 755 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 DGAT2Q96PD7 388 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 MAPKAP1Q9BPZ7 522 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 FAM173AQ9BQD7 235 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 PELOQ9BRX2 385 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 ENKD1Q9H0I2 346 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 RPF2Q9H7B2 306 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 ZDHHC11Q9H8X9 412 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 PPT2Q9UMR5 302 aa11.3□□□□□ -0.6
GTF3C1-204ENST00000564664 WWP2O00308 870 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 FOXE1O00358 373 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 KLK8O60259 260 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 CDC40O60508 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 LDB3O75112 727 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 GLSO94925 669 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 OR6B1O95007 311 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 KLHL2O95198 593 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 P04436 131 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 C2P06681 752 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 TPOP07202 933 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 HOXD4P09016 255 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 PHBP35232 272 aa11.29□□□□□ -0.6
GTF3C1-204ENST00000564664 BUD31P41223 144 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms