RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 OR1C1Q15619 314 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 SGO1Q5FBB7 561 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 ZNF678Q5SXM1 525 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 CLEC18BQ6UXF7 455 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 CLEC18CQ8NCF0 446 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 ST6GALNAC3Q8NDV1 305 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 MYRIPQ8NFW9 859 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 TRPC4APQ8TEL6 797 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 THAP3Q8WTV1 239 aaPredicted RBP17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 TANKQ92844 425 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 ANKRD9Q96BM1 317 aaPredicted RBP17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 C5orf34Q96MH7 638 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 DDX31Q9H8H2 851 aaKnown RBP17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 LYARQ9NX58 379 aaKnown RBP17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 AHSPQ9NZD4 102 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 LRFN1Q9P244 771 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 SNX6Q9UNH7 406 aa17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 PPIEQ9UNP9 301 aaKnown RBP17.12■□□□□ 0.33
SYNGR3-204ENST00000564642 PTPN13Q12923 2485 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 C17orf105B2RV13 164 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 PPP6CO00743 305 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 PROM1O43490 865 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 GLRA3O75311 464 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 EEDO75530 441 aaKnown RBP17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 SEMA3DO95025 777 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 CRYABP02511 175 aaKnown RBP17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 FAM58BPP0C7Q3 252 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 EDN3P14138 238 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 COX7A2P14406 83 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 BSGP35613 385 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 CYB561P49447 251 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 HNRNPH2P55795 449 aaKnown RBP17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 TNFRSF17Q02223 184 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 ID2Q02363 134 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 BIKQ13323 160 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 UNC50Q53HI1 259 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 C18orf63Q68DL7 685 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 SPINK14Q6IE38 97 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 LETMD1Q6P1Q0 360 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 NUDT13Q86X67 352 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 TDRPQ86YL5 185 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 OR4N5Q8IXE1 308 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 MORN4Q8NDC4 146 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 MDS2Q8NDY4 140 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 OR14A16Q8NHC5 309 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 DNAJB8Q8NHS0 232 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 PTPMT1Q8WUK0 201 aaPredicted RBP17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 TAAR6Q96RI8 345 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 ZNF717Q9BY31 904 aaPredicted RBP17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 WDR41Q9HAD4 459 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 KLHL1Q9NR64 748 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 ATG4BQ9Y4P1 393 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 PCDHGB6Q9Y5F9 930 aa17.11■□□□□ 0.33
SYNGR3-204ENST00000564642 A0A0A6YYD5 115 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 TMPRSS11DO60235 418 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 FGF17O60258 216 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 ZNF500O60304 480 aaPredicted RBP17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 ZFAND5O76080 213 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 OR4F21O95013 312 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 SLU7O95391 586 aaKnown RBP17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 CCT5P48643 541 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 GPR143P51810 404 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 PRKAA2P54646 552 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 MRM1Q6IN84 353 aaKnown RBP17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 PAGE2Q7Z2X7 111 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 TMEM178AQ8NBL3 297 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 EPS8L3Q8TE67 593 aaKnown RBP17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 SELENOMQ8WWX9 145 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 CCDC126Q96EE4 140 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 RBM18Q96H35 190 aaKnown RBP17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 DGAT2Q96PD7 388 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 TMEM237Q96Q45 408 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 OR8D2Q9GZM6 311 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 TRPS1Q9UHF7 1281 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 SLC12A4Q9UP95 1085 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 STK38LQ9Y2H1 464 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 ASB4Q9Y574 426 aa17.1■□□□□ 0.33
SYNGR3-204ENST00000564642 SPENQ96T58 3664 aaKnown RBP17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 A0A1B0GTL3 188 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 ARHGAP10A1A4S6 786 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 FOXO6A8MYZ6 492 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 DYRK3O43781 588 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 CDH16O75309 829 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 MLYCDO95822 493 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 PDYNP01213 254 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 GBAP04062 536 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 SP1P08047 785 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 MYL2P10916 166 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 VSNL1P62760 191 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 FOLH1Q04609 750 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 RASA2Q15283 850 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 MAPKAPK3Q16644 382 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 SLC25A25Q6KCM7 469 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 HSDL2Q6YN16 418 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 ARMC10Q8N2F6 343 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 TMEM156Q8N614 296 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 FAM98AQ8NCA5 519 aaKnown RBP17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 NR4A3Q92570 626 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 L3HYPDHQ96EM0 354 aa17.09■□□□□ 0.33
SYNGR3-204ENST00000564642 MRPL1Q9BYD6 325 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms