RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 PRKAR2BP31323 418 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 SLC15A1P46059 708 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 CXCL12P48061 93 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 SLC9A3P48764 834 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 ARSEP51690 589 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 CDH13P55290 713 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 MAT1AQ00266 395 aaKnown RBP1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 FCHO2Q0JRZ9 810 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 BTG3Q14201 252 aaPredicted RBP1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 GCKRQ14397 625 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 DUSP28Q4G0W2 176 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 CCDC30Q5VVM6 783 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 TMEM211Q6ICI0 200 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 LEKR1Q6ZMV7 388 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 ARMCX2Q7L311 632 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 FAM131BQ86XD5 332 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 ZFAND4Q86XD8 727 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 MMD2Q8IY49 270 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 ZNF595Q8IYB9 648 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 CHCHD4Q8N4Q1 142 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 KLHDC1Q8N7A1 406 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 Q8N7P7 452 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 THAP8Q8NA92 274 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 SLC37A3Q8NCC5 494 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 VN1R2Q8NFZ6 395 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 MORC4Q8TE76 937 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 C1orf147Q96MC9 270 aaPredicted RBP1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 NAP1L5Q96NT1 182 aaPredicted RBP1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 MAP3K3Q99759 626 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 OVOL2Q9BRP0 275 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 EDEM2Q9BV94 578 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 TUBB1Q9H4B7 451 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 EPS15L1Q9UBC2 864 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 C19orf25Q9UFG5 118 aaPredicted RBP1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 NUDCQ9Y266 331 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 PTRH2Q9Y3E5 179 aaKnown RBP1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 WIPI2Q9Y4P8 454 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 SEC16AO15027 2179 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 TACC2O95359 2948 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 PHLPP2Q6ZVD8 1323 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 ADGRA3Q8IWK6 1321 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 TRIP11Q15643 1979 aa1.89□□□□□ -2.11
SUB1P3-201ENST00000564581 GTF3C1Q12789 2109 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 A0A087X0M5 115 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 A0A1B0GX30 115 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 TRABD2BA6NFA1 517 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 RSPH10B2B2RC85 870 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 B4DLN1 442 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 ANHXE9PGG2 379 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 CDX4O14627 284 aaPredicted RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 TFECO14948 347 aaPredicted RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 TSPAN1O60635 241 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 RHOBTB1O94844 696 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 RSPH10BP0C881 870 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 STAG3L1P0CL83 205 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 HAPLN1P10915 354 aaPredicted RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 SFTPCP11686 197 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 GJA1P17302 382 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 TRIM21P19474 475 aaKnown RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 CD27P26842 260 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 MRPL12P52815 198 aaKnown RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 PNLIPRP2P54317 469 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 HNRNPKP61978 463 aaKnown RBP eCLIP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 NDPQ00604 133 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 GIT2Q14161 759 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 MLF2Q15773 248 aaPredicted RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 LETM2Q2VYF4 491 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 ALFQ53S48 1182 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 RAB41Q5JT25 222 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 GARNL3Q5VVW2 1013 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 DHRS7BQ6IAN0 325 aaPredicted RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 C11orf63Q6NUN7 778 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 NOTUMQ6P988 496 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 VITQ6UXI7 678 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 NUP54Q7Z3B4 507 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 KBTBD6Q86V97 674 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 NUDT13Q86X67 352 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 EXOC8Q8IYI6 725 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 LGI2Q8N0V4 545 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 RTL3Q8N8U3 475 aaKnown RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 MRPL43Q8N983 215 aaKnown RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 DEFB124Q8NES8 71 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 OR7A2PQ8NGA2 310 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 NPRL2Q8WTW4 380 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 SNRNP27Q8WVK2 155 aaKnown RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 SYN2Q92777 582 aaPredicted RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 SPDL1Q96EA4 605 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 C4orf45Q96LM5 186 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 LPAR4Q99677 370 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 HOXD1Q9GZZ0 328 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 ADNPQ9H2P0 1102 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 OPA3Q9H6K4 179 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 MYH16Q9H6N6 1097 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 RPAP3Q9H6T3 665 aaPredicted RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 FBXO2Q9UK22 296 aaPredicted RBP1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 PADI2Q9Y2J8 665 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 TMEM131Q92545 1883 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 ZMYM6O95789 1325 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 RAD50Q92878 1312 aa1.88□□□□□ -2.11
SUB1P3-201ENST00000564581 BAZ2AQ9UIF9 1905 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms