RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 LYRM4Q9HD34 91 aa18.26■□□□□ 0.51
SPSB3-204ENST00000563741 GID8Q9NWU2 228 aa18.26■□□□□ 0.51
SPSB3-204ENST00000563741 PHF11Q9UIL8 331 aa18.26■□□□□ 0.51
SPSB3-204ENST00000563741 CROTQ9UKG9 612 aa18.26■□□□□ 0.51
SPSB3-204ENST00000563741 PCDHA9Q9Y5H5 950 aa18.26■□□□□ 0.51
SPSB3-204ENST00000563741 SCN3AQ9NY46 2000 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 MAP1BP46821 2468 aaKnown RBP18.25■□□□□ 0.51
SPSB3-204ENST00000563741 GLOD5A6NK44 160 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 NR2F6P10588 404 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 NQO1P15559 274 aaKnown RBP18.25■□□□□ 0.51
SPSB3-204ENST00000563741 PTPN6P29350 595 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 PGM1P36871 562 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 TNFRSF17Q02223 184 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 FOXM1Q08050 763 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 RBM44Q6ZP01 1051 aaKnown RBP18.25■□□□□ 0.51
SPSB3-204ENST00000563741 GPR135Q8IZ08 494 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 CLECL1Q8IZS7 167 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 TTC29Q8NA56 475 aaPredicted RBP18.25■□□□□ 0.51
SPSB3-204ENST00000563741 ITCHQ96J02 903 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 CLPTM1LQ96KA5 538 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 CSF3RQ99062 836 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 THTPAQ9BU02 230 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 SLC6A13Q9NSD5 602 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 TAS2R7Q9NYW3 318 aa18.25■□□□□ 0.51
SPSB3-204ENST00000563741 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.25■□□□□ 0.51
SPSB3-204ENST00000563741 COL27A1Q8IZC6 1860 aaPredicted RBP18.24■□□□□ 0.51
SPSB3-204ENST00000563741 PRSS51A0A1B0GVH4 220 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 C1orf226A1L170 272 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 WASHC1A8K0Z3 465 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 AGRPO00253 132 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 RNASET2O00584 256 aaKnown RBP18.24■□□□□ 0.51
SPSB3-204ENST00000563741 CSO75390 466 aaKnown RBP18.24■□□□□ 0.51
SPSB3-204ENST00000563741 KCNH1O95259 989 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 NSA2O95478 260 aaKnown RBP18.24■□□□□ 0.51
SPSB3-204ENST00000563741 NPPAP01160 153 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 CDKN2CP42773 168 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 ACY1Q03154 408 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 TRA2AQ13595 282 aaKnown RBP eCLIP18.24■□□□□ 0.51
SPSB3-204ENST00000563741 LRIF1Q5T3J3 769 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 ANXA8L1Q5VT79 327 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 PRAMEF17Q5VTA0 474 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 FAM180BQ6P0A1 224 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 TLDC1Q6P9B6 456 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 BNC2Q6ZN30 1099 aaPredicted RBP18.24■□□□□ 0.51
SPSB3-204ENST00000563741 CCDC115Q96NT0 180 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 NPLQ9BXD5 320 aaPredicted RBP18.24■□□□□ 0.51
SPSB3-204ENST00000563741 PAIP1Q9H074 479 aaKnown RBP18.24■□□□□ 0.51
SPSB3-204ENST00000563741 SPAG4Q9NPE6 437 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 CUTCQ9NTM9 273 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 ERVK-11Q9UQG0 969 aa18.24■□□□□ 0.51
SPSB3-204ENST00000563741 RRP15Q9Y3B9 282 aaKnown RBP18.24■□□□□ 0.51
SPSB3-204ENST00000563741 A0A096LPI6 279 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 TRBV5-3A0A0A0MS03 114 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 RFXANKO14593 260 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 PGRMC2O15173 223 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 HOXB9P17482 250 aaPredicted RBP18.23■□□□□ 0.51
SPSB3-204ENST00000563741 CPN2P22792 545 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 SLC6A2P23975 617 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 BUD31P41223 144 aaPredicted RBP18.23■□□□□ 0.51
SPSB3-204ENST00000563741 CORO7P57737 925 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 SKP1P63208 163 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 C16orf72Q14CZ0 275 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 GTDC1Q4AE62 458 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 NIPAL1Q6NVV3 410 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 SLC48A1Q6P1K1 146 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 MSRB3Q8IXL7 192 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 ULK2Q8IYT8 1036 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 CA13Q8N1Q1 262 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 ZCCHC14Q8WYQ9 949 aaKnown RBP18.23■□□□□ 0.51
SPSB3-204ENST00000563741 EXOSC8Q96B26 276 aaKnown RBP18.23■□□□□ 0.51
SPSB3-204ENST00000563741 NXPE2Q96DL1 559 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 CGREF1Q99674 301 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 HOPXQ9BPY8 73 aaPredicted RBP18.23■□□□□ 0.51
SPSB3-204ENST00000563741 NRSN2Q9GZP1 204 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 CCDC86Q9H6F5 360 aaKnown RBP18.23■□□□□ 0.51
SPSB3-204ENST00000563741 SLAMF7Q9NQ25 335 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 MS4A12Q9NXJ0 267 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 SLC25A37Q9NYZ2 338 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 VAPAQ9P0L0 249 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 BTNL2Q9UIR0 455 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 SERTAD3Q9UJW9 196 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 UTS2RQ9UKP6 389 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 PRPF19Q9UMS4 504 aaKnown RBP18.23■□□□□ 0.51
SPSB3-204ENST00000563741 SLC7A2P52569 658 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 ISXQ2M1V0 245 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 FAM214AQ32MH5 1076 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 VPS37AQ8NEZ2 397 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 DNAJB8Q8NHS0 232 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 OR6C1Q96RD1 312 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 PANX1Q96RD7 426 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 CDRT15Q96T59 188 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 TRIM8Q9BZR9 551 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 MMADHCQ9H3L0 296 aaPredicted RBP18.23■□□□□ 0.51
SPSB3-204ENST00000563741 CES1P1Q9UKY3 287 aa18.23■□□□□ 0.51
SPSB3-204ENST00000563741 CYR61O00622 381 aa18.22■□□□□ 0.51
SPSB3-204ENST00000563741 PDPK1O15530 556 aa18.22■□□□□ 0.51
SPSB3-204ENST00000563741 ZNF749O43361 778 aa18.22■□□□□ 0.51
SPSB3-204ENST00000563741 ERN1O75460 977 aaKnown RBP18.22■□□□□ 0.51
SPSB3-204ENST00000563741 CAPNS1P04632 268 aa18.22■□□□□ 0.51
SPSB3-204ENST00000563741 DDX5P17844 614 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms