RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 CDC14AQ9UNH5 594 aa12.56□□□□□ -0.4
SPG7-207ENST00000563218 SH2B3Q9UQQ2 575 aa12.56□□□□□ -0.4
SPG7-207ENST00000563218 FIS1Q9Y3D6 152 aa12.56□□□□□ -0.4
SPG7-207ENST00000563218 TRAF6Q9Y4K3 522 aa12.56□□□□□ -0.4
SPG7-207ENST00000563218 CCDC168Q8NDH2 2452 aa12.56□□□□□ -0.4
SPG7-207ENST00000563218 ZNF469Q96JG9 3925 aaPredicted RBP12.55□□□□□ -0.4
SPG7-207ENST00000563218 ERICH4A6NGS2 130 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 A8MUI8 341 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 UBFD1O14562 309 aaKnown RBP12.55□□□□□ -0.4
SPG7-207ENST00000563218 DCTN3O75935 186 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 WDR47O94967 919 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 SLC16A8O95907 504 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 C8orf89P0DMQ9 161 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 EPB42P16452 691 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 ARL1P40616 181 aaPredicted RBP12.55□□□□□ -0.4
SPG7-207ENST00000563218 PKNOX1P55347 436 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 PRDX1Q06830 199 aaKnown RBP12.55□□□□□ -0.4
SPG7-207ENST00000563218 ZXDCQ2QGD7 858 aaPredicted RBP12.55□□□□□ -0.4
SPG7-207ENST00000563218 ZNF766Q5HY98 468 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 ABHD17BQ5VST6 288 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 GPRIN3Q6ZVF9 776 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 VN1R4Q7Z5H5 301 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 ADCK2Q7Z695 626 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 LRRC56Q8IYG6 542 aaPredicted RBP12.55□□□□□ -0.4
SPG7-207ENST00000563218 ZNF295-AS1Q8N0V1 137 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 CLYBLQ8N0X4 340 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 SNX31Q8N9S9 440 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 AGAP11Q8TF27 550 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 RILPQ96NA2 401 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 ZNF382Q96SR6 550 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 RBCK1Q9BYM8 510 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 NOL11Q9H8H0 719 aaKnown RBP12.55□□□□□ -0.4
SPG7-207ENST00000563218 IPPKQ9H8X2 491 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 ZBTB26Q9HCK0 441 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 KLHL1Q9NR64 748 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 ITGB1BP2Q9UKP3 347 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 ASB1Q9Y576 335 aa12.55□□□□□ -0.4
SPG7-207ENST00000563218 PHF3Q92576 2039 aaKnown RBP12.55□□□□□ -0.4
SPG7-207ENST00000563218 TRPC5OSA6NMA1 111 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 TMEM233B4DJY2 109 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 E7ENX8 843 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 FAM227AF5H4B4 570 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 AZIN1O14977 448 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 SLC19A2O60779 497 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 DIAPH2O60879 1101 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 ESRRBO95718 433 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 OTCP00480 354 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 CRYABP02511 175 aaKnown RBP12.54□□□□□ -0.4
SPG7-207ENST00000563218 FGF4P08620 206 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 COX6B1P14854 86 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 EZRP15311 586 aaKnown RBP12.54□□□□□ -0.4
SPG7-207ENST00000563218 IL1RNP18510 177 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 PTGER4P35408 488 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 GDF5P43026 501 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 SLC6A12P48065 614 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 IDH3AP50213 366 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 CCNG1P51959 295 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 TAP2Q03519 686 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 TUBA3CQ13748 450 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 PDCD2Q16342 344 aaPredicted RBP12.54□□□□□ -0.4
SPG7-207ENST00000563218 BTBD16Q32M84 506 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 MINDY4Q4G0A6 757 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 MFSD4BQ5TF39 518 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 GARNL3Q5VVW2 1013 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 TUBA3EQ6PEY2 450 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 AGTRAPQ6RW13 159 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 CPEB2Q7Z5Q1 589 aaKnown RBP12.54□□□□□ -0.4
SPG7-207ENST00000563218 MDS2Q8NDY4 140 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 DNAJB8Q8NHS0 232 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 ZCCHC10Q8TBK6 192 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 RERGQ96A58 199 aaPredicted RBP12.54□□□□□ -0.4
SPG7-207ENST00000563218 TUBB6Q9BUF5 446 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 DNAJC11Q9NVH1 559 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 STMN3Q9NZ72 180 aa12.54□□□□□ -0.4
SPG7-207ENST00000563218 H7BY64 318 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 SGK494L7N484 410 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 PPP6CO00743 305 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 OR7A17O14581 309 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 ZNF195O14628 629 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 SKAP2O75563 359 aaPredicted RBP12.53□□□□□ -0.4
SPG7-207ENST00000563218 CHEK2O96017 543 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 IMPA1P29218 277 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 KIR3DL1P43629 444 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 HSF1Q00613 529 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 IFT88Q13099 833 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 NAE1Q13564 534 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 NAA25Q14CX7 972 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 CLEC6AQ6EIG7 209 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 EPGNQ6UW88 154 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 RPTNQ6XPR3 784 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 ACAD11Q709F0 780 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 TRPM8Q7Z2W7 1104 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 MAVSQ7Z434 540 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 MILR1Q7Z6M3 343 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 ANKRD37Q7Z713 158 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 PDSS2Q86YH6 399 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 KLHDC8AQ8IYD2 350 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 SUN3Q8TAQ9 357 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 ADAMTS18Q8TE60 1221 aa12.53□□□□□ -0.4
SPG7-207ENST00000563218 STON2Q8WXE9 905 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms