RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 IL23RQ5VWK5 629 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 FAAH2Q6GMR7 532 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 EPGNQ6UW88 154 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 LARP4Q71RC2 724 aaKnown RBP eCLIP17.7■□□□□ 0.42
RAB40C-207ENST00000563109 LAPTM4BQ86VI4 370 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 SHISA5Q8N114 240 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 LIX1Q8N485 282 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 C7orf57Q8NEG2 295 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 ACTRT2Q8TDY3 377 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 CHMP6Q96FZ7 201 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 MAELQ96JY0 434 aaKnown RBP17.7■□□□□ 0.42
RAB40C-207ENST00000563109 PTCHD1Q96NR3 888 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 NSRP1Q9H0G5 558 aaKnown RBP17.7■□□□□ 0.42
RAB40C-207ENST00000563109 ASIC5Q9NY37 505 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 SCN2AQ99250 2005 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 A0A087WV48 116 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 CTNSO60931 367 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 PRKRAO75569 313 aaKnown RBP17.69■□□□□ 0.42
RAB40C-207ENST00000563109 RECKO95980 971 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 BCKDHAP12694 445 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 DRD2P14416 443 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 MMP11P24347 488 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 HNRNPFP52597 415 aaKnown RBP17.69■□□□□ 0.42
RAB40C-207ENST00000563109 TMPRSS3P57727 454 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 TLE3Q04726 772 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 C2orf80Q0P641 193 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 STX4Q12846 297 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 IL10RAQ13651 578 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 NSDHLQ15738 373 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 UGT8Q16880 541 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 OGFOD2Q6N063 350 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 SPATA19Q7Z5L4 167 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 CLNKQ7Z7G1 428 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 SCUBE1Q8IWY4 988 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 FAM9CQ8IZT9 166 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 TMEM52Q8NDY8 209 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 PLPP5Q8NEB5 264 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 CEP70Q8NHQ1 597 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 NACC2Q96BF6 587 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 THOC1Q96FV9 657 aaKnown RBP17.69■□□□□ 0.42
RAB40C-207ENST00000563109 IP6K3Q96PC2 410 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 TSSK3Q96PN8 268 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 TCF7L2Q9NQB0 619 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 MIEF1Q9NQG6 463 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 PSME2Q9UL46 239 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 PCDHA9Q9Y5H5 950 aa17.69■□□□□ 0.42
RAB40C-207ENST00000563109 CDC14CA4D256 554 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 GLOD5A6NK44 160 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 TAF4O00268 1085 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 PEX12O00623 359 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 EFSO43281 561 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 PRKAR1AP10644 381 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 DDX5P17844 614 aaKnown RBP17.68■□□□□ 0.42
RAB40C-207ENST00000563109 MAOAP21397 527 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 LSP1P33241 339 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 HPCAL1P37235 193 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 IDH3AP50213 366 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 BTG2P78543 158 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 ACTN3Q08043 901 aaPredicted RBP17.68■□□□□ 0.42
RAB40C-207ENST00000563109 CDC20Q12834 499 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 SERTAD2Q14140 314 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 TSLPQ969D9 159 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 ZNF317Q96PQ6 595 aaPredicted RBP17.68■□□□□ 0.42
RAB40C-207ENST00000563109 DCTN4Q9UJW0 460 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 SSUH2Q9Y2M2 353 aa17.68■□□□□ 0.42
RAB40C-207ENST00000563109 A0A0G2JND7 137 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 OR2W5A6NFC9 320 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 LDB3O75112 727 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 PCSK2P16519 638 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 WT1P19544 449 aaPredicted RBP17.67■□□□□ 0.42
RAB40C-207ENST00000563109 DDCP20711 480 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 TACR1P25103 407 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 PIK3R1P27986 724 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 RPL3P39023 403 aaKnown RBP17.67■□□□□ 0.42
RAB40C-207ENST00000563109 CRTC2Q53ET0 693 aaPredicted RBP17.67■□□□□ 0.42
RAB40C-207ENST00000563109 FAM71E1Q6IPT2 247 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 SLC48A1Q6P1K1 146 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 TMEM205Q6UW68 189 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 PPP1R32Q7Z5V6 425 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 MRGPREQ86SM8 312 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 CLHC1Q8NHS4 586 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 RFWD2Q8NHY2 731 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 STON2Q8WXE9 905 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 KLHL29Q96CT2 875 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 OR52B2Q96RD2 323 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 CCDC28BQ9BUN5 200 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 NECTIN3Q9NQS3 549 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 GIMAP4Q9NUV9 329 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 EHD3Q9NZN3 535 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 MAPRE3Q9UPY8 281 aa17.67■□□□□ 0.42
RAB40C-207ENST00000563109 IGKV3D-11A0A0A0MRZ8 115 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 PGRMC2O15173 223 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 FGF17O60258 216 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 GPR75O95800 540 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 G6PDP11413 515 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 OR4D2P58180 307 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 FOLH1Q04609 750 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 BIKQ13323 160 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 LSM12Q3MHD2 195 aaKnown RBP17.66■□□□□ 0.42
RAB40C-207ENST00000563109 LANCL3Q6ZV70 420 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms