RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CCNKO75909 580 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 FHP07954 510 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 IL7RP16871 459 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 PDHA2P29803 388 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 KCNC4Q03721 635 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 C1orf61Q13536 156 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SSX2Q16385 188 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 C4orf46Q504U0 113 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 OR4C11Q6IEV9 310 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 TNFAIP8L2Q6P589 184 aaPredicted RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 ZNF730Q6ZMV8 503 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SLC29A4Q7RTT9 530 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 KLHDC8BQ8IXV7 354 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 DPP10Q8N608 796 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 WDR12Q9GZL7 423 aaKnown RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 DMRT3Q9NQL9 472 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 ACTR10Q9NZ32 417 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 BTNL2Q9UIR0 455 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 A0A1B0GTW7 788 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SH3PXD2BA1X283 911 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 E7EQ34 232 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 EMC8O43402 210 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SOX6P35712 828 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 FOLH1Q04609 750 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 PRDX1Q06830 199 aaKnown RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 MTAPQ13126 283 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 EIF4EBP2Q13542 120 aaPredicted RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 HTR4Q13639 388 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 RCAN2Q14206 197 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 TCTN1Q2MV58 587 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 ZNF311Q5JNZ3 666 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SBSNQ6UWP8 590 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 TECPR1Q7Z6L1 1165 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SLC15A3Q8IY34 581 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SLC45A3Q96JT2 553 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 RDH12Q96NR8 316 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 PRTFDC1Q9NRG1 225 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 C14orf105Q9NVL8 296 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 PDP1Q9P0J1 537 aaPredicted RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 ZBTB11O95625 1053 aaPredicted RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 CER1O95813 267 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 IL3P08700 152 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 GSTM3P21266 225 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 IGFALSP35858 605 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 HTR6P50406 440 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 ADPRHP54922 357 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 PTGR1Q14914 329 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 PPP1R3AQ16821 1122 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 PHF19Q5T6S3 580 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 COMMD6Q7Z4G1 85 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 LINC00469Q8N7U9 141 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 OR52E1Q8NGJ3 308 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 ZNF563Q8TA94 476 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 MYEOVQ96EZ4 313 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 HSPA12BQ96MM6 686 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SMIM14Q96QK8 99 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SERINC2Q96SA4 455 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 CD180Q99467 661 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 C1QTNF3Q9BXJ4 246 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 MYNNQ9NPC7 610 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 CUEDC1Q9NWM3 386 aaPredicted RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 EHD3Q9NZN3 535 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 ACAD8Q9UKU7 415 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SRPK3Q9UPE1 567 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 NUP205Q92621 2012 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SLC5A10A0PJK1 596 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 NOBOXO60393 691 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 CREG1O75629 220 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 CLCA4Q14CN2 919 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 RPE65Q16518 533 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 NANOGP8Q6NSW7 305 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 CEACAM20Q6UY09 585 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 LARP4Q71RC2 724 aaKnown RBP eCLIP7.22□□□□□ -1.25
TCF4-216ENST00000562680 THAP5Q7Z6K1 395 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SPEM1Q8N4L4 309 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 COL21A1Q96P44 957 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 LGR4Q9BXB1 951 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 NT5DC2Q9H857 520 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 NANOGQ9H9S0 305 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SLC39A1Q9NY26 324 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 IFT52Q9Y366 437 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 TDRD15B5MCY1 1934 aaKnown RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 APOL3O95236 402 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 C6orf47O95873 294 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 CISD3P0C7P0 127 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 ITPKBP27987 946 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 DNAJA1P31689 397 aaKnown RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 MSX2P35548 267 aaPredicted RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 ETV5P41161 510 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 VSX2P58304 361 aaPredicted RBP7.22□□□□□ -1.25
TCF4-216ENST00000562680 PGM2L1Q6PCE3 622 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 OR2L5Q8NG80 312 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 OR56A3Q8NH54 315 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 ENKURQ8TC29 256 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 GINS4Q9BRT9 223 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 TBC1D17Q9HA65 648 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 CPNE7Q9UBL6 633 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 PRSS44E7EML9 344 aa7.21□□□□□ -1.25
TCF4-216ENST00000562680 BCAT2O15382 392 aaPredicted RBP7.21□□□□□ -1.25
TCF4-216ENST00000562680 GADD45GO95257 159 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms