RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 MOCOSQ96EN8 888 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ATXN7L3BQ96GX2 97 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 HSH2DQ96JZ2 352 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 TMEM68Q96MH6 324 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 KCTD7Q96MP8 289 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 SFXN2Q96NB2 322 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 SLC38A3Q99624 504 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 TREX2Q9BQ50 279 aaPredicted RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 RBCK1Q9BYM8 510 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 CPEB1Q9BZB8 566 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 NKX6-2Q9C056 277 aaPredicted RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 ANKRD19PQ9H560 264 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ZNF408Q9H9D4 720 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 GALNT9Q9HCQ5 603 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 TCF7L1Q9HCS4 588 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 JPH1Q9HDC5 661 aaPredicted RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 LTB4R2Q9NPC1 389 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 BRD7Q9NPI1 651 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 TREX1Q9NSU2 369 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 CLN6Q9NWW5 311 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 PDP1Q9P0J1 537 aaPredicted RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 KLHL8Q9P2G9 620 aaPredicted RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 MYEF2Q9P2K5 600 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 SEC14L3Q9UDX4 400 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 NDOR1Q9UHB4 597 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 BTNL2Q9UIR0 455 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 OGDHLQ9ULD0 1010 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 FZD10Q9ULW2 581 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 NDRG2Q9UN36 371 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 PCDHA10Q9Y5I2 948 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ZFC3H1O60293 1989 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 ZNF646O15015 1829 aaPredicted RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 PRAMEF33A0A0G2JMD5 474 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 SLC12A8A0AV02 714 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 PLSCR5A0PG75 271 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 RAB19A4D1S5 217 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 ASB14A6NK59 587 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 ADM5C9JUS6 153 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 NEDD8-MDP1E9PL57 170 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 UBE2CO00762 179 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 GPR171O14626 319 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 PER2O15055 1255 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 SMAD6O43541 496 aaKnown RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 SGCEO43556 437 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 GREM1O60565 184 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 TPST2O60704 377 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 PRAMEF10O60809 474 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 NBNO60934 754 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 STBD1O95210 358 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 EGFP01133 1207 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 IFNA10P01566 189 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 ESR1P03372 595 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 STSP08842 583 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 HIST1H2AGP0C0S8 130 aaPredicted RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 HSMCR30P0CW71 290 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 SLC2A1P11166 492 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 SELLP14151 372 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 CPN1P15169 458 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 CPEP16870 476 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 ITGB5P18084 799 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 HIST1H2ADP20671 130 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 HOXA13P31271 388 aaPredicted RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 SLC6A4P31645 630 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 PMELP40967 661 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 PIK3CGP48736 1102 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 STK19P49842 368 aaPredicted RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 ARSDP51689 593 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 AFF1P51825 1210 aaKnown RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 NUDT6P53370 316 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 DIO3P55073 304 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 CDC42P60953 191 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 SPCS3P61009 180 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 TSPAN5P62079 268 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 YBX1P67809 324 aaKnown RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 HOXC5Q00444 222 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 E2F1Q01094 437 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 GPR17Q13304 367 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 TPBGQ13641 420 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 VEZF1Q14119 521 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 CSHL1Q14406 222 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 UBXN2BQ14CS0 331 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 SPHARQ15513 63 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 SNAPC1Q16533 368 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 ZNF284Q2VY69 593 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 ZNF792Q3KQV3 632 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 TKFCQ3LXA3 575 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 PLK5Q496M5 336 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 CERCAMQ5T4B2 595 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 PRAMEF18Q5VWM3 479 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 DCAF15Q66K64 600 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 HIST2H2AA3Q6FI13 130 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 APOBEC3HQ6NTF7 200 aaKnown RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 CD200R1LQ6Q8B3 271 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 USP53Q70EK8 1073 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 CBLL1Q75N03 491 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 CTU1Q7Z7A3 348 aaKnown RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 KIAA0907Q7Z7F0 614 aaPredicted RBP6.94□□□□□ -1.3
CDH1-203ENST00000561751 MFSD6LQ8IWD5 586 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 SPAG16Q8N0X2 631 aa6.94□□□□□ -1.3
CDH1-203ENST00000561751 SVBPQ8N300 66 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms