RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 TLE4Q04727 773 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 STX4Q12846 297 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 DLG1Q12959 904 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 EFTUD2Q15029 972 aaKnown RBP eCLIP10.78□□□□□ -0.682e-9■□□□□ 9.4
USP3-220ENST00000561381 ZKSCAN8Q15776 578 aaPredicted RBP10.78□□□□□ -0.68
USP3-220ENST00000561381 CDKL4Q5MAI5 379 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 C3orf62Q6ZUJ4 267 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 CMC1Q7Z7K0 106 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 CCDC71Q8IV32 467 aaPredicted RBP10.78□□□□□ -0.68
USP3-220ENST00000561381 OR4N5Q8IXE1 308 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 GPALPP1Q8IXQ4 340 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 EID3Q8N140 333 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 RNF175Q8N4F7 328 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 ACOT4Q8N9L9 421 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 MORN4Q8NDC4 146 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 SLC2A12Q8TD20 617 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 DOK4Q8TEW6 326 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 ZNF473Q8WTR7 871 aaKnown RBP10.78□□□□□ -0.68
USP3-220ENST00000561381 CDKL2Q92772 493 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 DAZLQ92904 295 aaKnown RBP10.78□□□□□ -0.68
USP3-220ENST00000561381 ANKRD9Q96BM1 317 aaPredicted RBP10.78□□□□□ -0.68
USP3-220ENST00000561381 UBXN10Q96LJ8 280 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 KCNC2Q96PR1 638 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 TREX2Q9BQ50 279 aaPredicted RBP10.78□□□□□ -0.68
USP3-220ENST00000561381 EFCAB11Q9BUY7 163 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 SORBS1Q9BX66 1292 aaKnown RBP10.78□□□□□ -0.68
USP3-220ENST00000561381 MS4A8Q9BY19 250 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 TTTY12Q9BZ98 90 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 CD244Q9BZW8 370 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 ALG9Q9H6U8 611 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 ZDHHC11Q9H8X9 412 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 LYRM4Q9HD34 91 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 PRM3Q9NNZ6 103 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 GRHL1Q9NZI5 618 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 TXNDC16Q9P2K2 825 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 TNFRSF10DQ9UBN6 386 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 RNF112Q9ULX5 631 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 PYCARDQ9ULZ3 195 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 LIPGQ9Y5X9 500 aa10.78□□□□□ -0.68
USP3-220ENST00000561381 HCFC1P51610 2035 aa10.77□□□□□ -0.68
USP3-220ENST00000561381 UBXN8O00124 270 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 RAD51CO43502 376 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 FGF17O60258 216 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 GLSO94925 669 aaPredicted RBP10.77□□□□□ -0.69
USP3-220ENST00000561381 PCNAP12004 261 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 IGFBP2P18065 325 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 HIST1H1TP22492 207 aaPredicted RBP10.77□□□□□ -0.69
USP3-220ENST00000561381 HPDP32754 393 aaPredicted RBP10.77□□□□□ -0.69
USP3-220ENST00000561381 NUP107P57740 925 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 RAB10P61026 200 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 RNF4P78317 190 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 TFF3Q07654 80 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 TGM3Q08188 693 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 PMPCAQ10713 525 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 E2F2Q14209 437 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 RCN2Q14257 317 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 TBCCQ15814 346 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 GXYLT1Q4G148 440 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 PAGE2BQ5JRK9 111 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 TMEM211Q6ICI0 200 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 DGAT2L6Q6ZPD8 337 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 LRRC70Q7Z2Q7 622 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 ISCA2Q86U28 154 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 CTAGE3PQ8IX95 158 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 TMEM251Q8N6I4 163 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 BBOF1Q8ND07 529 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 OR5M9Q8NGP3 310 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 OR14A16Q8NHC5 309 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 LILRB4Q8NHJ6 448 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 ZNF721Q8TF20 911 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 CHTF18Q8WVB6 975 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 RND1Q92730 232 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 ERP44Q9BS26 406 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 TBCDQ9BTW9 1192 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 OR51B5Q9H339 312 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 TP63Q9H3D4 680 aaPredicted RBP10.77□□□□□ -0.69
USP3-220ENST00000561381 MCCC2Q9HCC0 563 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 SEMA4BQ9NPR2 832 aaPredicted RBP10.77□□□□□ -0.69
USP3-220ENST00000561381 PNPLA3Q9NST1 481 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 WHRNQ9P202 907 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 PHF3Q92576 2039 aaKnown RBP10.77□□□□□ -0.69
USP3-220ENST00000561381 AKAP9Q99996 3911 aa10.77□□□□□ -0.69
USP3-220ENST00000561381 WASHC1A8K0Z3 465 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 SUPT3HB4E1H0 165 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 ACOT7O00154 380 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 HRKO00198 91 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 SUPT3HO75486 399 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 PRKRAO75569 313 aaKnown RBP10.76□□□□□ -0.69
USP3-220ENST00000561381 TOXO94900 526 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 S100BP04271 92 aaPredicted RBP10.76□□□□□ -0.69
USP3-220ENST00000561381 CELA3AP09093 270 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 SLC35E2BP0CK96 405 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 CCL3P10147 92 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 CNR1P21554 472 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 CPN2P22792 545 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 CHRNB4P30926 498 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 CASP2P42575 452 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 SSR2P43308 183 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 MAGEA5P43359 124 aa10.76□□□□□ -0.69
USP3-220ENST00000561381 DNASE1L1P49184 302 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms