RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 N4BP2L2Q92802 583 aaPredicted RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 NTAN1Q96AB6 310 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 C18orf8Q96DM3 657 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 DAZAP1Q96EP5 407 aaKnown RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 OR2A14Q96R47 310 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 USP28Q96RU2 1077 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 MGME1Q9BQP7 344 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 NUP85Q9BW27 656 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 WWP1Q9H0M0 922 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 ATG10Q9H0Y0 220 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 DEFB127Q9H1M4 99 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 SRMSQ9H3Y6 488 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 TFB2MQ9H5Q4 396 aaKnown RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 TRIM45Q9H8W5 580 aaPredicted RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 UPF2Q9HAU5 1272 aaKnown RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 MAGEF1Q9HAY2 307 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 EXOC1Q9NV70 894 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 B4GALT7Q9UBV7 327 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 LPAR3Q9UBY5 353 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 PLCL2Q9UPR0 1127 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 MED16Q9Y2X0 877 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 ARID1AO14497 2285 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 ABCA1O95477 2261 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 PCM1Q15154 2024 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 A0A096LNT2 108 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 IGHV3-20A0A0C4DH32 117 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 A0A1B0GVC2 190 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 TCRBV5S1A1TA0A578 114 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 FAM170AA1A519 330 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ARHGAP42A6NI28 874 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 C2CD4BA6NLJ0 364 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 HSPB2A8KAH6 182 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 GABRR3A8MPY1 467 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 C2orf74A8MZ97 194 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 KDM4EB2RXH2 506 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 TFECO14948 347 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 CETN3O15182 167 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 SLC25A12O75746 678 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 UQCRHP07919 91 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 TPBGLP0DKB5 382 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 UGT2B7P16662 529 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 VCLP18206 1134 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 SRD5A1P18405 259 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 CXCR2P25025 360 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 LOXP28300 417 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 CEACAM8P31997 349 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 CDH5P33151 784 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 PRKCIP41743 596 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 MMP13P45452 471 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ATP5J2P56134 94 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 TPTEP56180 551 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 SNX16P57768 344 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 KRTAP10-6P60371 365 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 IRX6P78412 446 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 SORDQ00796 357 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 OC90Q02509 493 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 FHL1Q13642 323 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 HSPB2Q16082 182 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 CYP1B1Q16678 543 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 MEP1AQ16819 746 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 PGS1Q32NB8 556 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ZIK1Q3SY52 487 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 ANKRD20A8PQ5CZ79 823 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ZNF569Q5MCW4 686 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 PLAG1Q6DJT9 500 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 TMEM220Q6QAJ8 160 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ZNF813Q6ZN06 617 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 SLFN11Q7Z7L1 901 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 AMIGO1Q86WK6 493 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 TRAPPC5Q8IUR0 188 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 TRAM1L1Q8N609 369 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 LRRC17Q8N6Y2 441 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 NPWQ8N729 165 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 HORMAD2Q8N7B1 307 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 RASGEF1AQ8N9B8 481 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ZFP62Q8NB50 900 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 LINC00301Q8NCQ3 95 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ACVR1CQ8NER5 493 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ABHD11Q8NFV4 315 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.45□□□□□ -1.86
HERC1-211ENST00000560983 R3HDM4Q96D70 268 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 SLC35A4Q96G79 324 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 C12orf66Q96MD2 445 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ZNF285Q96NJ3 590 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ZNF599Q96NL3 588 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 MOGAT1Q96PD6 335 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 PIGQQ9BRB3 760 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 TUBB6Q9BUF5 446 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 SPATA16Q9BXB7 569 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ADGRE3Q9BY15 652 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 SHARPINQ9H0F6 387 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 XKR8Q9H6D3 395 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 SYNCQ9H7C4 482 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 UBTD1Q9HAC8 227 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 ZNF304Q9HCX3 659 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 UBE2TQ9NPD8 197 aaPredicted RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 CUTCQ9NTM9 273 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 TRMT1Q9NXH9 659 aaKnown RBP3.45□□□□□ -1.86
HERC1-211ENST00000560983 SPHK1Q9NYA1 384 aa3.45□□□□□ -1.86
HERC1-211ENST00000560983 PKD2L2Q9NZM6 624 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms