RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PERPQ96FX8 193 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 OR8D2Q9GZM6 311 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 CCDC68Q9H2F9 335 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 BOKQ9UMX3 212 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 JRKLQ9Y4A0 524 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 CLCA3PQ9Y6N3 262 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 C15orf38-AP3S2A0A0A6YYH1 394 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 A0A0G2JN53 185 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 MYOCOSA0A1B0GUC4 107 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 AP3B1O00203 1094 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 CES2O00748 559 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 ZSCAN12O43309 604 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 SERPINA6P08185 405 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 OPRM1P35372 400 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 RAB38P57729 211 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 KCNJ2P63252 427 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 KRTAP1-1Q07627 177 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 DUSP8Q13202 625 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 CCNG2Q16589 344 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 ZNF791Q3KP31 576 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 PRAMEF20Q5VT98 475 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 SLC22A10Q63ZE4 541 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 DUPD1Q68J44 220 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 FAM47BQ8NA70 645 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 MORN4Q8NDC4 146 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 TRPV3Q8NET8 790 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 OR14A16Q8NHC5 309 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 PPP1R14CQ8TAE6 165 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 PAQR8Q8TEZ7 354 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 EEF1AKMT1Q8WVE0 214 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 SLC5A11Q8WWX8 675 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 DAZLQ92904 295 aaKnown RBP11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 ISL2Q96A47 359 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 HSPBAP1Q96EW2 488 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 OSBPL9Q96SU4 736 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 TIMP4Q99727 224 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 FRMD8P1Q9BZ68 369 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 QPCTLQ9NXS2 382 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 NPFFR2Q9Y5X5 522 aa11.76□□□□□ -0.53
RABGGTA-213ENST00000560127 TCRBV7S3A2A0A539 114 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 MBD3L3A6NE82 208 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 SIAH2O43255 324 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 CNOT4O95628 575 aaKnown RBP11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 IL18BPO95998 194 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 IFNA16P05015 189 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 BASP1P80723 227 aaKnown RBP11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 TIAL1Q01085 375 aaKnown RBP eCLIP11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 SP140Q13342 867 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 CSHL1Q14406 222 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 CYP1B1Q16678 543 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 MPEG1Q2M385 716 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 PIGGQ5H8A4 983 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 HMBOX1Q6NT76 420 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 LYPD8Q6UX82 237 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 ZNF595Q8IYB9 648 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 OR5L2Q8NGL0 311 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 MBD3L2Q8NHZ7 208 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 TSNARE1Q96NA8 513 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 CSF3RQ99062 836 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 CCL19Q99731 98 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 RBM24Q9BX46 236 aaKnown RBP11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 NPLQ9BXD5 320 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 PRDM14Q9GZV8 571 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 GALNT8Q9NY28 637 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 VTI1BQ9UEU0 232 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 SNX12Q9UMY4 172 aa11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 EIF3LQ9Y262 564 aaKnown RBP11.75□□□□□ -0.53
RABGGTA-213ENST00000560127 CD8B2A6NJW9 211 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 CYR61O00622 381 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 PAMP19021 973 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 SLC1A2P43004 574 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 ASPHQ12797 758 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 RBBP5Q15291 538 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 ACKR1Q16570 336 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 LRRC8EQ6NSJ5 796 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 UGT3A1Q6NUS8 523 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 PALM2Q8IXS6 379 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 PM20D2Q8IYS1 436 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 C9orf106Q8NAJ2 232 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 SLC2A12Q8TD20 617 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 GAL3ST3Q96A11 431 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 PBKQ96KB5 322 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 JSRP1Q96MG2 331 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 TRIB1Q96RU8 372 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 AIF1LQ9BQI0 150 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 ALOXE3Q9BYJ1 711 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 PELI2Q9HAT8 420 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 ARL15Q9NXU5 204 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 C6orf203Q9P0P8 240 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 TRMT6Q9UJA5 497 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 CAMK2AQ9UQM7 478 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 MRPS33Q9Y291 106 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 ZKSCAN5Q9Y2L8 839 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 COMMD10Q9Y6G5 202 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 YLPM1P49750 1951 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 ALPK2Q86TB3 2170 aa11.74□□□□□ -0.53
RABGGTA-213ENST00000560127 C17orf105B2RV13 164 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 CASKO14936 926 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 CTNSO60931 367 aa11.73□□□□□ -0.53
RABGGTA-213ENST00000560127 HAUS5O94927 633 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms