RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 MTX2O75431 263 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 VPS26AO75436 327 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 PRKRAO75569 313 aaKnown RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 CDC123O75794 336 aaPredicted RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 ADCY5O95622 1261 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 SFTPBP07988 381 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 CCDC159P0C7I6 412 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 ACP2P11117 423 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 EPB41P11171 864 aaKnown RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 RALAP11233 206 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 TNNI3P19429 210 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 EFNA1P20827 205 aaPredicted RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 GDI1P31150 447 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 MAGEA11P43364 429 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 METAP1P53582 386 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 DSCR10P59022 87 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 BEX3Q00994 111 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 HSF2Q03933 536 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 SLC3A1Q07837 685 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 COX10Q12887 443 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 SNX1Q13596 522 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 IDI1Q13907 227 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 CARTPTQ16568 116 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 SGSM1Q2NKQ1 1148 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 UGT3A2Q3SY77 523 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 ELFN2Q5R3F8 820 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 SULT1C3Q6IMI6 304 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 KLHL10Q6JEL2 608 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 FAM159AQ6UWV7 190 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 Q6ZSR9 355 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 TMEM26Q6ZUK4 368 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 P2RY8Q86VZ1 359 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 MISPQ8IVT2 679 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 CENPLQ8N0S6 344 aaPredicted RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 SPAG16Q8N0X2 631 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 RAB42Q8N4Z0 105 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 CERS5Q8N5B7 392 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 BCORP1Q8N888 145 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 EIF1ADQ8N9N8 165 aaKnown RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 NOA1Q8NC60 698 aaKnown RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 NPEPL1Q8NDH3 523 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 OR4K1Q8NGD4 311 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 OR13C2Q8NGS9 318 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 OR4A16Q8NH70 328 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 HAS2Q92819 552 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 ULK4Q96C45 1275 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 CNOT6LQ96LI5 555 aaKnown RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 GUCD1Q96NT3 240 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 CCT7Q99832 543 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 PRMT1Q99873 361 aaKnown RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 TRAF4Q9BUZ4 470 aaPredicted RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 PANK2Q9BZ23 570 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 SLC39A8Q9C0K1 460 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 TMEM117Q9H0C3 514 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 C10orf88Q9H8K7 445 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 ROPN1Q9HAT0 212 aaPredicted RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 FAM207AQ9NSI2 230 aaPredicted RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 PANK4Q9NVE7 773 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 PTBP2Q9UKA9 531 aaKnown RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 MRPS2Q9Y399 296 aaKnown RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 TMED5Q9Y3A6 229 aa3.22□□□□□ -1.89
SPG11-218ENST00000559754 COL5A2P05997 1499 aaPredicted RBP3.22□□□□□ -1.89
SPG11-218ENST00000559754 MYH14Q7Z406 1995 aaKnown RBP3.21□□□□□ -1.89
SPG11-218ENST00000559754 A0A0U1RRA0 63 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 A0A1B0GUL7 405 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 CTAGE15A4D2H0 777 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 M0R296 226 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 TLX2O43763 284 aaPredicted RBP3.21□□□□□ -1.9
SPG11-218ENST00000559754 LANCL1O43813 399 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 CSDE1O75534 798 aaKnown RBP3.21□□□□□ -1.9
SPG11-218ENST00000559754 BAG3O95817 575 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 SERPINF2P08697 491 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 DLATP10515 647 aaKnown RBP3.21□□□□□ -1.9
SPG11-218ENST00000559754 TMOD1P28289 359 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 PRDX6P30041 224 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 SSTR1P30872 391 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 MTIF2P46199 727 aaKnown RBP3.21□□□□□ -1.9
SPG11-218ENST00000559754 GBE1Q04446 702 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 KLC1Q07866 573 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 RASGEF1BQ0VAM2 473 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 TMED1Q13445 227 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 CUL2Q13617 745 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 HNRNPDQ14103 355 aaKnown RBP3.21□□□□□ -1.9
SPG11-218ENST00000559754 NONOQ15233 471 aaKnown RBP eCLIP3.21□□□□□ -1.9
SPG11-218ENST00000559754 STX1AQ16623 288 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 TPD52L1Q16890 204 aaPredicted RBP3.21□□□□□ -1.9
SPG11-218ENST00000559754 CCDC152Q4G0S7 254 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 DCAF10Q5QP82 559 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 SPINK14Q6IE38 97 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 FUT10Q6P4F1 479 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 CTAGE6Q86UF2 777 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 ZDHHC21Q8IVQ6 265 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 CDH26Q8IXH8 852 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 MARVELD2Q8N4S9 558 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 CCDC63Q8NA47 563 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 STKLD1Q8NE28 680 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 HPSE2Q8WWQ2 592 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 FCGR1BQ92637 280 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 RPGRIP1Q96KN7 1286 aa3.21□□□□□ -1.9
SPG11-218ENST00000559754 TTC25Q96NG3 672 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms