RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 GPRIN3Q6ZVF9 776 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 UBE3DQ7Z6J8 389 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CUZD1Q86UP6 607 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 RPS19BP1Q86WX3 136 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 SCUBE1Q8IWY4 988 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 BEST3Q8N1M1 668 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 TMEM151AQ8N4L1 468 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 FAM26EQ8N5C1 309 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 TMEM156Q8N614 296 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CCNYL1Q8N7R7 359 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CDYL2Q8N8U2 506 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 GBP7Q8N8V2 638 aaPredicted RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 Q8NA96 180 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 TMEM178AQ8NBL3 297 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 MORN4Q8NDC4 146 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CATSPER1Q8NEC5 780 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 OR4F6Q8NGB9 312 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 OR14A16Q8NHC5 309 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PRR7Q8TB68 274 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 RDH11Q8TC12 318 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 METTL6Q8TCB7 284 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 ELP5Q8TE02 316 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 EPS8L3Q8TE67 593 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 ZNF483Q8TF39 744 aaPredicted RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 FAR1Q8WVX9 515 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 SELENOMQ8WWX9 145 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PSMF1Q92530 271 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 L3HYPDHQ96EM0 354 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 VMP1Q96GC9 406 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 C5orf34Q96MH7 638 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 NSUN5Q96P11 429 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 SMC6Q96SB8 1091 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 ZNF382Q96SR6 550 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 MAPKAP1Q9BPZ7 522 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PELOQ9BRX2 385 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 FAIM2Q9BWQ8 316 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 ROPN1BQ9BZX4 212 aaPredicted RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 EPB41L4BQ9H329 900 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 CDCP1Q9H5V8 836 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 DDX31Q9H8H2 851 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 ROPN1Q9HAT0 212 aaPredicted RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 NECTIN3Q9NQS3 549 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 OLAHQ9NV23 265 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 ASF1BQ9NVP2 202 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.09□□□□□ -1.75
SNX1-205ENST00000559339 LYARQ9NX58 379 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 ANKRD10Q9NXR5 420 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PLA2G3Q9NZ20 509 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 KCMF1Q9P0J7 381 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 LRFN1Q9P244 771 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 VPS29Q9UBQ0 182 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 TRPS1Q9UHF7 1281 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 ADAM29Q9UKF5 820 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PSME2Q9UL46 239 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PPIEQ9UNP9 301 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 SLC12A4Q9UP95 1085 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 YARS2Q9Y2Z4 477 aaKnown RBP4.09□□□□□ -1.75
SNX1-205ENST00000559339 ATG4BQ9Y4P1 393 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 PCDHGB6Q9Y5F9 930 aa4.09□□□□□ -1.75
SNX1-205ENST00000559339 MDC1Q14676 2089 aaKnown RBP4.09□□□□□ -1.76
SNX1-205ENST00000559339 ANKRD12Q6UB98 2062 aa4.09□□□□□ -1.76
SNX1-205ENST00000559339 BAHCC1Q9P281 2608 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 BSNQ9UPA5 3926 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 A0A0A6YYD5 115 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 TRBV11-1A0A0K0K1C0 115 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GNG14A0A1W2PPG7 69 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 A0A1W2PPM1 405 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 FER1L5A0AVI2 2057 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 C1orf226A1L170 272 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GOLGA6L10A6NI86 522 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GLOD5A6NK44 160 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GABRR3A8MPY1 467 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 A8MVJ9 347 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 C4orf51C9J302 202 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 KLRC4-KLRK1H3BQV0 150 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 TMPRSS11DO60235 418 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 FGF17O60258 216 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 DLX3O60479 287 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ITGA10O75578 1167 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SLC25A12O75746 678 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 OR4F21O95013 312 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 AGFG2O95081 481 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ESRRBO95718 433 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GPR75O95800 540 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CHEK2O96017 543 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 PDYNP01213 254 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GBAP04062 536 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ENO1P06733 434 aaKnown RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 KLK1P06870 262 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SBK3P0C264 359 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 MYZAPP0CAP1 466 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 SLC35E2P0CK97 266 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 NR2F6P10588 404 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 EDN3P14138 238 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 CPA3P15088 417 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 ALOX15P16050 662 aaPredicted RBP4.08□□□□□ -1.76
SNX1-205ENST00000559339 TSPAN8P19075 237 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 GNLYP22749 145 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 PIK3R1P27986 724 aa4.08□□□□□ -1.76
SNX1-205ENST00000559339 TPP2P29144 1249 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms