RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 SLAMF1Q13291 335 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 GLE1Q53GS7 698 aaKnown RBP16.52■□□□□ 0.24
TPM1-218ENST00000559281 SULF2Q8IWU5 870 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 OR8K3Q8NH51 312 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 ASB15Q8WXK1 588 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 IFT81Q8WYA0 676 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 TANKQ92844 425 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 RBM18Q96H35 190 aaKnown RBP16.52■□□□□ 0.24
TPM1-218ENST00000559281 OR8D2Q9GZM6 311 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 IPPKQ9H8X2 491 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 CHST11Q9NPF2 352 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 COPS7AQ9UBW8 275 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 PHF11Q9UIL8 331 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 TINAGQ9UJW2 476 aa16.52■□□□□ 0.24
TPM1-218ENST00000559281 H0YIV9 168 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 SAP18O00422 153 aaKnown RBP16.51■□□□□ 0.23
TPM1-218ENST00000559281 PRRG2O14669 202 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 TFECO14948 347 aaPredicted RBP16.51■□□□□ 0.23
TPM1-218ENST00000559281 OR2J2O76002 312 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 ALDOAP04075 364 aaKnown RBP16.51■□□□□ 0.23
TPM1-218ENST00000559281 AGAP20933 346 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 GTF2H2Q13888 395 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 GTF2H2CQ6P1K8 395 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 GPR180Q86V85 440 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 ZCCHC7Q8N3Z6 543 aaKnown RBP16.51■□□□□ 0.23
TPM1-218ENST00000559281 SLC44A1Q8WWI5 657 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 ATP6V1E2Q96A05 226 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 DGAT2Q96PD7 388 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 FMO2Q99518 471 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 MTERF1Q99551 399 aaKnown RBP16.51■□□□□ 0.23
TPM1-218ENST00000559281 FUT8Q9BYC5 575 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 RPF2Q9H7B2 306 aaKnown RBP16.51■□□□□ 0.23
TPM1-218ENST00000559281 DMRT3Q9NQL9 472 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 PSD3Q9NYI0 1048 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 CPSF2Q9P2I0 782 aaKnown RBP16.51■□□□□ 0.23
TPM1-218ENST00000559281 TMCO1Q9UM00 188 aa16.51■□□□□ 0.23
TPM1-218ENST00000559281 MYOCOSA0A1B0GUC4 107 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 KRT38O76015 456 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 ACSL3O95573 720 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 CTAGE8P0CG41 777 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 CNTFP26441 200 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 BUD31P41223 144 aaPredicted RBP16.5■□□□□ 0.23
TPM1-218ENST00000559281 CPSF6Q16630 551 aaKnown RBP eCLIP16.5■□□□□ 0.23
TPM1-218ENST00000559281 RNFT1Q5M7Z0 435 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 IL20RBQ6UXL0 311 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 MDGA2Q7Z553 956 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 CTAGE4Q8IX94 777 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 ZFP62Q8NB50 900 aaPredicted RBP16.5■□□□□ 0.23
TPM1-218ENST00000559281 C16orf52Q8NHV5 167 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 SLC2A12Q8TD20 617 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 ANKRD9Q96BM1 317 aaPredicted RBP16.5■□□□□ 0.23
TPM1-218ENST00000559281 ART5Q96L15 291 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 GPR78Q96P69 363 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 CDC42EP4Q9H3Q1 356 aaKnown RBP16.5■□□□□ 0.23
TPM1-218ENST00000559281 LIN28AQ9H9Z2 209 aaKnown RBP16.5■□□□□ 0.23
TPM1-218ENST00000559281 MEMO1Q9Y316 297 aa16.5■□□□□ 0.23
TPM1-218ENST00000559281 ARHGAP10A1A4S6 786 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 TMEM200CA6NKL6 621 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 WWP2O00308 870 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 FOXE1O00358 373 aaPredicted RBP16.49■□□□□ 0.23
TPM1-218ENST00000559281 PRKNO60260 465 aaPredicted RBP16.49■□□□□ 0.23
TPM1-218ENST00000559281 CLDN9O95484 217 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 COL6A2P12110 1019 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 ARL1P40616 181 aaPredicted RBP16.49■□□□□ 0.23
TPM1-218ENST00000559281 STT3AP46977 705 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 RPS13P62277 151 aaKnown RBP16.49■□□□□ 0.23
TPM1-218ENST00000559281 RNF4P78317 190 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 ID2Q02363 134 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 CUL3Q13618 768 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 TSNAXIP1Q2TAA8 658 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 PAOXQ6QHF9 649 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 OPN5Q6U736 354 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 GOLGA7Q7Z5G4 137 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 L3MBTL4Q8NA19 623 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 PSD4Q8NDX1 1056 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 SCYL1Q96KG9 808 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 SGCZQ96LD1 299 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 RASL10BQ96S79 203 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 WDR41Q9HAD4 459 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 DMGDHQ9UI17 866 aaKnown RBP16.49■□□□□ 0.23
TPM1-218ENST00000559281 MYO7BQ6PIF6 2116 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 TEX15Q9BXT5 2789 aa16.49■□□□□ 0.23
TPM1-218ENST00000559281 CENPEQ02224 2701 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 PLPP1O14494 284 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 FGF17O60258 216 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 SMIM24O75264 130 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 HTR1EP28566 365 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 PTGS2P35354 604 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 HK2P52789 917 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 GPR85P60893 370 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 IGLV3-21P80748 117 aaPredicted RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 PLIN5Q00G26 463 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 TECRLQ5HYJ1 363 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 C10orf62Q5T681 223 aaPredicted RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 LGSNQ5TDP6 509 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 CYP20A1Q6UW02 462 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 C16orf47Q6ZP98 133 aaPredicted RBP16.48■□□□□ 0.23
TPM1-218ENST00000559281 RGS9BPQ6ZS82 235 aa16.48■□□□□ 0.23
TPM1-218ENST00000559281 OR4N5Q8IXE1 308 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms