RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CCDC189A1A4V9 331 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 A8MVJ9 347 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 TRIM49D1C9J1S8 452 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 G3V3Y1 287 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 TFECO14948 347 aaPredicted RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 PEX1O43933 1283 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 KLK8O60259 260 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 OR6B1O95007 311 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 ETHE1O95571 254 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 ESRRAP11474 423 aaPredicted RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 ABOP16442 354 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 PTGER1P34995 402 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 SOX3P41225 446 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 PIK3CBP42338 1070 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 SERPINB9P50453 376 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 NEK2P51955 445 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 HNRNPH2P55795 449 aaKnown RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 TNFRSF17Q02223 184 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 PCDH1Q08174 1060 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 SERTAD2Q14140 314 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.08□□□□□ -0.64
HERC1-202ENST00000558324 KRTCAP3Q53RY4 240 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 LIPJQ5W064 366 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 C18orf63Q68DL7 685 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 IL20RBQ6UXL0 311 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 HSDL2Q6YN16 418 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 MRGPRGQ86SM5 289 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 SULF2Q8IWU5 870 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 MORN4Q8NDC4 146 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 SLC2A12Q8TD20 617 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 ITLN2Q8WWU7 325 aaPredicted RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 ASB15Q8WXK1 588 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 ATP6V1E2Q96A05 226 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 ANKRD9Q96BM1 317 aaPredicted RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 REPS1Q96D71 796 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 MTFMTQ96DP5 389 aaKnown RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 DGAT2Q96PD7 388 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 FUT8Q9BYC5 575 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 TSPYL1Q9H0U9 437 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 RPF2Q9H7B2 306 aaKnown RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 NOL11Q9H8H0 719 aaKnown RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 HPF1Q9NWY4 346 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 MYOTQ9UBF9 498 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 YARS2Q9Y2Z4 477 aaKnown RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 ATG4BQ9Y4P1 393 aa11.08□□□□□ -0.64
HERC1-202ENST00000558324 TNPO3Q9Y5L0 923 aaKnown RBP11.08□□□□□ -0.64
HERC1-202ENST00000558324 POLEQ07864 2286 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 NAV2Q8IVL1 2488 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 SYNDIG1LA6NDD5 238 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 GLOD5A6NK44 160 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 TMEM200CA6NKL6 621 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 H0YIV9 168 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 KLRC4-KLRK1H3BQV0 150 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 CDK2AP1O14519 115 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 OR7A17O14581 309 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 HS6ST1O60243 411 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 CDC40O60508 579 aaKnown RBP eCLIP11.07□□□□□ -0.64
HERC1-202ENST00000558324 EEDO75530 441 aaKnown RBP11.07□□□□□ -0.64
HERC1-202ENST00000558324 KRT38O76015 456 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 GBAP04062 536 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 COX7A2P14406 83 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 MAGEA12P43365 314 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 CCNG1P51959 295 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 HK2P52789 917 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 RNF4P78317 190 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 FOLH1Q04609 750 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 C3P1Q6ZMU1 363 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 DGAT2L6Q6ZPD8 337 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 NCCRP1Q6ZVX7 275 aaPredicted RBP11.07□□□□□ -0.64
HERC1-202ENST00000558324 GPR180Q86V85 440 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 SPPL2CQ8IUH8 684 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 GHDCQ8N2G8 530 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 PSD4Q8NDX1 1056 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 OR52B6Q8NGF0 335 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 DCAKDQ8WVC6 231 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 ISL2Q96A47 359 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 PPWD1Q96BP3 646 aaKnown RBP11.07□□□□□ -0.64
HERC1-202ENST00000558324 NSUN5Q96P11 429 aaKnown RBP11.07□□□□□ -0.64
HERC1-202ENST00000558324 RASL10BQ96S79 203 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 TIMMDC1Q9NPL8 285 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 COPS7AQ9UBW8 275 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 PHF11Q9UIL8 331 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 NFU1Q9UMS0 254 aa11.07□□□□□ -0.64
HERC1-202ENST00000558324 ZGRF1Q86YA3 2104 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 A0A087WUV0 522 aaPredicted RBP11.06□□□□□ -0.64
HERC1-202ENST00000558324 A0A0G2JMM0 328 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 EXOC1LA0A1B0GW35 172 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 A0A1W2PPB8 328 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 A0A1W2PRS3 328 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 PINLYPA6NC86 204 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 WASHC1A8K0Z3 465 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 KIR3DP1A8MWS1 328 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 HRKO00198 91 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 TMPRSS11DO60235 418 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 UGDHO60701 494 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 SMIM24O75264 130 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 CLDN9O95484 217 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 TUBB4AP04350 444 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 RBP1P09455 135 aa11.06□□□□□ -0.64
HERC1-202ENST00000558324 NR2F6P10588 404 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms