RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 RHOXF2Q9BQY4 288 aa9.89□□□□□ -0.83
SHF-203ENST00000558294 IL1RL2Q9HB29 575 aa9.89□□□□□ -0.83
SHF-203ENST00000558294 DNAJB12Q9NXW2 375 aaKnown RBP9.89□□□□□ -0.83
SHF-203ENST00000558294 NSMCE4AQ9NXX6 385 aa9.89□□□□□ -0.83
SHF-203ENST00000558294 TXNDC16Q9P2K2 825 aa9.89□□□□□ -0.83
SHF-203ENST00000558294 VTI1BQ9UEU0 232 aa9.89□□□□□ -0.83
SHF-203ENST00000558294 MRPS33Q9Y291 106 aaKnown RBP9.89□□□□□ -0.83
SHF-203ENST00000558294 OARD1Q9Y530 152 aa9.89□□□□□ -0.83
SHF-203ENST00000558294 CLCA3PQ9Y6N3 262 aa9.89□□□□□ -0.83
SHF-203ENST00000558294 ZNF407Q9C0G0 2248 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 A0A088AWK7 358 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 FAM95CA0A1B0GW59 222 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 SYNDIG1LA6NDD5 238 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 AQP7O14520 342 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 SUSD5O60279 629 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 CTNSO60931 367 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 WDR1O75083 606 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 H2AFYO75367 372 aaKnown RBP9.88□□□□□ -0.83
SHF-203ENST00000558294 CTAG2O75638 210 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 WDR47O94967 919 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 IFNA16P05015 189 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 CELA3AP09093 270 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 GSTA2P09210 222 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 ZNF10P21506 573 aaPredicted RBP9.88□□□□□ -0.83
SHF-203ENST00000558294 CERS1P27544 350 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 GDF5P43026 501 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 DNASE1L1P49184 302 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 PLA2G16P53816 162 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 LIM2P55344 173 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 FOLH1Q04609 750 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 FOXO1Q12778 655 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 ZNF460Q14592 562 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 C18orf21Q32NC0 220 aaPredicted RBP9.88□□□□□ -0.83
SHF-203ENST00000558294 ADNP2Q6IQ32 1131 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 ABHD17CQ6PCB6 329 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 FAM47EQ6ZV65 393 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 CYS1Q717R9 158 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 ZC3HC1Q86WB0 502 aaKnown RBP9.88□□□□□ -0.83
SHF-203ENST00000558294 IFT20Q8IY31 132 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 PPM1NQ8N819 430 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 LRRN4CLQ8ND94 238 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 OR8K3Q8NH51 312 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 OR14A16Q8NHC5 309 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 DAZLQ92904 295 aaKnown RBP9.88□□□□□ -0.83
SHF-203ENST00000558294 RHBDF1Q96CC6 855 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 MRRFQ96E11 262 aaKnown RBP9.88□□□□□ -0.83
SHF-203ENST00000558294 SERINC2Q96SA4 455 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 EGFL8Q99944 293 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 PHACTR1Q9C0D0 580 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 REXO4Q9GZR2 422 aaKnown RBP9.88□□□□□ -0.83
SHF-203ENST00000558294 NT5DC2Q9H857 520 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 SACM1LQ9NTJ5 587 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 CCM2LQ9NUG4 571 aaPredicted RBP9.88□□□□□ -0.83
SHF-203ENST00000558294 ZNF358Q9NW07 568 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 DAPP1Q9UN19 280 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 MTO1Q9Y2Z2 717 aaKnown RBP9.88□□□□□ -0.83
SHF-203ENST00000558294 EML6Q6ZMW3 1958 aa9.88□□□□□ -0.83
SHF-203ENST00000558294 MYOCOSA0A1B0GUC4 107 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 FAM159BA6NKW6 160 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 FAM155BO75949 473 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 CCL3P10147 92 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 STX2P32856 288 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 MAN2A2P49641 1150 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 SLC12A2P55011 1212 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 MTTPP55157 894 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 TAS2R39P59534 338 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 RNF4P78317 190 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 EFTUD2Q15029 972 aaKnown RBP eCLIP9.87□□□□□ -0.83
SHF-203ENST00000558294 TSNQ15631 228 aaKnown RBP9.87□□□□□ -0.83
SHF-203ENST00000558294 SLC25A35Q3KQZ1 300 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 KBTBD12Q3ZCT8 623 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 C1orf185Q5T7R7 199 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 TRIM40Q6P9F5 258 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 ARSKQ6UWY0 536 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 ZZZ3Q8IYH5 903 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 KRT78Q8N1N4 520 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 NKAPQ8N5F7 415 aaKnown RBP9.87□□□□□ -0.83
SHF-203ENST00000558294 CHDHQ8NE62 594 aaPredicted RBP9.87□□□□□ -0.83
SHF-203ENST00000558294 SLC2A12Q8TD20 617 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 ANKRD49Q8WVL7 239 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 SGCZQ96LD1 299 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 FMO2Q99518 471 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 CPNE1Q99829 537 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 ALOXE3Q9BYJ1 711 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 OR8D2Q9GZM6 311 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 PITHD1Q9GZP4 211 aaPredicted RBP9.87□□□□□ -0.83
SHF-203ENST00000558294 LIME1Q9H400 295 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 RHOJQ9H4E5 214 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 SEMA4BQ9NPR2 832 aaPredicted RBP9.87□□□□□ -0.83
SHF-203ENST00000558294 PRDM7Q9NQW5 492 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 TUBA8Q9NY65 449 aaPredicted RBP9.87□□□□□ -0.83
SHF-203ENST00000558294 SPRR3Q9UBC9 169 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 ST6GALNAC2Q9UJ37 374 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 ACAD8Q9UKU7 415 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 NFU1Q9UMS0 254 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 ATG4BQ9Y4P1 393 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 VPS13CQ709C8 3753 aa9.87□□□□□ -0.83
SHF-203ENST00000558294 ATP6AP2A0A1C7CYW4 349 aa9.86□□□□□ -0.83
SHF-203ENST00000558294 ANKDD1BA6NHY2 528 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms