RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 GBAP04062 536 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 IFI6P09912 130 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 RBMS1P29558 406 aaKnown RBP11.71□□□□□ -0.53
TPM1-209ENST00000558072 TRPC1P48995 793 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 NME5P56597 212 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 MXRA7P84157 204 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 RUNX2Q13950 521 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 MLC1Q15049 377 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 PGS1Q32NB8 556 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 FAM174BQ3ZCQ3 159 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 C6orf163Q5TEZ5 329 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 SLC48A1Q6P1K1 146 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 IGF2-ASQ6U949 168 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 C16orf89Q6UX73 402 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 HACD2Q6Y1H2 254 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 TMPRSS7Q7RTY8 843 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 ARPINQ7Z6K5 226 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 SNX32Q86XE0 403 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 TICAM1Q8IUC6 712 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 SHISA5Q8N114 240 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 FAM47BQ8NA70 645 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 OR51Q1Q8NH59 317 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 CLHC1Q8NHS4 586 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 VPS50Q96JG6 964 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 EGLN2Q96KS0 407 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 BBS4Q96RK4 519 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 MAPKAP1Q9BPZ7 522 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 YIPF2Q9BWQ6 316 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 SORBS1Q9BX66 1292 aaKnown RBP11.71□□□□□ -0.53
TPM1-209ENST00000558072 ULBP3Q9BZM4 244 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 TGIF2Q9GZN2 237 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 C1orf21Q9H246 121 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 POLR1BQ9H9Y6 1135 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 NEUROD4Q9HD90 331 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 SLC35C2Q9NQQ7 365 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 PISDQ9UG56 409 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 BTNL2Q9UIR0 455 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 UTS2RQ9UKP6 389 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 ATG4BQ9Y4P1 393 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 LOC100653049A0A140TA62 436 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 A0A1W2PR48 441 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 MEN1O00255 615 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 NVLO15381 856 aaKnown RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 PDPK1O15530 556 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 CTNSO60931 367 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 ERN1O75460 977 aaKnown RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 KRT34O76011 436 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 SOX30O94993 753 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 UNC5CO95185 931 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 LRATO95237 230 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 KCNH1O95259 989 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 MED26O95402 600 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 TIAF1O95411 115 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 AIFM1O95831 613 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 B3GALT4O96024 378 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 FHP07954 510 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 CSNK2A2P19784 350 aaPredicted RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 PPIBP23284 216 aaKnown RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 MAPK10P53779 464 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 HNRNPH2P55795 449 aaKnown RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 FOXC1Q12948 553 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 BNIP1Q12981 228 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 TARDBPQ13148 414 aaKnown RBP eCLIP11.7□□□□□ -0.54
TPM1-209ENST00000558072 NKAIN1Q4KMZ8 207 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 DNAL1Q4LDG9 190 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 C3orf38Q5JPI3 329 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 BHLHB9Q6PI77 547 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 OVCH1Q7RTY7 1134 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 PDSS2Q86YH6 399 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 FUNDC1Q8IVP5 155 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 ARHGAP24Q8N264 748 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 DPP10Q8N608 796 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 ESX1Q8N693 406 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 KRTCAP2Q8N6L1 136 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 OR5P2Q8WZ92 322 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 MOAP1Q96BY2 351 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 KLHL29Q96CT2 875 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 ZNF578Q96N58 590 aaPredicted RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 GBP5Q96PP8 586 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 HOPXQ9BPY8 73 aaPredicted RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 NRSN2Q9GZP1 204 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 SLC26A1Q9H2B4 701 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 ACTL8Q9H568 366 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 WDR54Q9H977 334 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 SEMA3GQ9NS98 782 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 IFT80Q9P2H3 777 aaPredicted RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 DHCR7Q9UBM7 475 aaKnown RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 TRPC4Q9UBN4 977 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 PADI1Q9ULC6 663 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 CORO2BQ9UQ03 480 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 PADI2Q9Y2J8 665 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 MRPS2Q9Y399 296 aaKnown RBP11.7□□□□□ -0.54
TPM1-209ENST00000558072 PCDHGA7Q9Y5G6 932 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 KNTC1P50748 2209 aa11.7□□□□□ -0.54
TPM1-209ENST00000558072 IGLV3-12A0A075B6K2 115 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 A0A1W2PRB8 838 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 C4orf51C9J302 202 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 CYR61O00622 381 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 RFXANKO14593 260 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 MRASO14807 208 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms