RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ZNF717Q9BY31 904 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 ALOXE3Q9BYJ1 711 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 DEFB126Q9BYW3 111 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 NOL11Q9H8H0 719 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 TRIM45Q9H8W5 580 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 ZBTB26Q9HCK0 441 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 ADAP2Q9NPF8 381 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 KLHL1Q9NR64 748 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 PSD3Q9NYI0 1048 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 VTI1BQ9UEU0 232 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 PCTPQ9UKL6 214 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 TMCO1Q9UM00 188 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 SLC5A6Q9Y289 635 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 PCDHGA11Q9Y5H2 935 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 TRBV11-1A0A0K0K1C0 115 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 ASPDHA6ND91 283 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 TMEM200CA6NKL6 621 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 FOXE1O00358 373 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 PRKNO60260 465 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 LDB3O75112 727 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 SMIM24O75264 130 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 EEDO75530 441 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 CLDN9O95484 217 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 ETHE1O95571 254 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 CRYABP02511 175 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 RPS17P08708 135 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 STSP08842 583 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 CD46P15529 392 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 PTX3P26022 381 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 BSGP35613 385 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 SSR2P43308 183 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 CLCN2P51788 898 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 NEK2P51955 445 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 ARFIP1P53367 373 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 HNRNPH2P55795 449 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 KCNK10P57789 538 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 IGLV3-21P80748 117 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 ID2Q02363 134 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 OC90Q02509 493 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 TRAF3Q13114 568 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 SLAMF1Q13291 335 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 ZRSR2Q15696 482 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 ELAVL1Q15717 326 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 C4orf17Q53FE4 359 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 LGSNQ5TDP6 509 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 MRM1Q6IN84 353 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 SLC25A25Q6KCM7 469 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 RPS27LQ71UM5 84 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 TMEM132CQ8N3T6 1108 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 ZCCHC7Q8N3Z6 543 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 THAP3Q8WTV1 239 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 PTPMT1Q8WUK0 201 aaPredicted RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 REPS1Q96D71 796 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 VMP1Q96GC9 406 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 CDK15Q96Q40 435 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 NTMT1Q9BV86 223 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 C1QTNF3Q9BXJ4 246 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 MRPL46Q9H2W6 279 aaKnown RBP8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 LRFN1Q9P244 771 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 FBXW2Q9UKT8 454 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 PPT2Q9UMR5 302 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 OSGIN2Q9Y236 505 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 ATG4BQ9Y4P1 393 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 ASB4Q9Y574 426 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 FREM3P0C091 2139 aa8.18□□□□□ -1.1
SNRPA1-206ENST00000558059 PKDREJQ9NTG1 2253 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 A0A0A6YYD5 115 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 A0A1B0GTL3 188 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 SYNDIG1LA6NDD5 238 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 WASHC1A8K0Z3 465 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 A8MT66 165 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 PPP6CO00743 305 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 PROM1O43490 865 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 TMPRSS11DO60235 418 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 FGF17O60258 216 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 ZFAND5O76080 213 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 IFNA16P05015 189 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 SP1P08047 785 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 CPN2P22792 545 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 CYB561P49447 251 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 HLCSP50747 726 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 CCNG1P51959 295 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 RAP1GDS1P52306 607 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 STX4Q12846 297 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 CUL3Q13618 768 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 SERTAD2Q14140 314 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 SLC29A2Q14542 456 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 C18orf63Q68DL7 685 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 HIST2H2BCQ6DN03 193 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 GFRALQ6UXV0 394 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 C16orf47Q6ZP98 133 aaPredicted RBP8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 GALNTL5Q7Z4T8 443 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 GPR180Q86V85 440 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 OR4N5Q8IXE1 308 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 GSPT2Q8IYD1 628 aaKnown RBP8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 HORMAD2Q8N7B1 307 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF321PQ8N8H1 164 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 MORN4Q8NDC4 146 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 OR14A16Q8NHC5 309 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF483Q8TF39 744 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms