RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SPRED3Q2MJR0 410 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 TRMT5Q32P41 509 aaKnown RBP15.91■□□□□ 0.14
SNX1-203ENST00000558040 DNAL1Q4LDG9 190 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 C6orf10Q5SRN2 563 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 DCAF12Q5T6F0 453 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 ARHGAP40Q5TG30 622 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 RINLQ6ZS11 566 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 RETREG3Q86VR2 466 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 DTWD1Q8N5C7 304 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 RBM15BQ8NDT2 890 aaKnown RBP15.91■□□□□ 0.14
SNX1-203ENST00000558040 OR51Q1Q8NH59 317 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 ZFP28Q8NHY6 868 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 KLHL29Q96CT2 875 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 SLC7A6OSQ96CW6 309 aaPredicted RBP15.91■□□□□ 0.14
SNX1-203ENST00000558040 ZBED6CLQ96FA7 236 aaPredicted RBP15.91■□□□□ 0.14
SNX1-203ENST00000558040 PEX11GQ96HA9 241 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 OR1F2PQ96R84 312 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 CSF3RQ99062 836 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 CTRCQ99895 268 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 BTBD10Q9BSF8 475 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 LRMDAQ9H2I8 198 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 SLC35C2Q9NQQ7 365 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 BTNL2Q9UIR0 455 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 PCDHGB4Q9UN71 923 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 MAN2B2Q9Y2E5 1009 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 MAP4K5Q9Y4K4 846 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 ZNF780BQ9Y6R6 833 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 MAU2Q9Y6X3 613 aa15.91■□□□□ 0.14
SNX1-203ENST00000558040 SCN3AQ9NY46 2000 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 MYO15AQ9UKN7 3530 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 CLDN4O14493 209 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 RFXANKO14593 260 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 PLD2O14939 933 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 PGRMC2O15173 223 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 DNAJB6O75190 326 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 ERN1O75460 977 aaKnown RBP15.9■□□□□ 0.14
SNX1-203ENST00000558040 TIAF1O95411 115 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 OR1D4P47884 311 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 TRPC1P48995 793 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 HNRNPFP52597 415 aaKnown RBP15.9■□□□□ 0.14
SNX1-203ENST00000558040 WNT3P56703 355 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 CLDN6P56747 220 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 PHC1P78364 1004 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 MAT1AQ00266 395 aaKnown RBP15.9■□□□□ 0.14
SNX1-203ENST00000558040 ABHD18Q0P651 414 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 COL9A2Q14055 689 aaPredicted RBP15.9■□□□□ 0.14
SNX1-203ENST00000558040 PAGE3Q5JUK9 113 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 C1orf189Q5VU69 101 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 DHDDSQ86SQ9 333 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 ANKRD46Q86W74 232 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 TMPRSS12Q86WS5 348 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 ZNF595Q8IYB9 648 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 OR4K14Q8NGD5 310 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 WDR36Q8NI36 951 aaKnown RBP15.9■□□□□ 0.14
SNX1-203ENST00000558040 DNAJB14Q8TBM8 379 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 GTF2H4Q92759 462 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 CIDECQ96AQ7 238 aaPredicted RBP15.9■□□□□ 0.14
SNX1-203ENST00000558040 TBC1D20Q96BZ9 403 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 CCDC115Q96NT0 180 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 PANX1Q96RD7 426 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 TAAR9Q96RI9 348 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 BBS4Q96RK4 519 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 DDA1Q9BW61 102 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 YIPF2Q9BWQ6 316 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 ASPSCR1Q9BZE9 553 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 ACSS1Q9NUB1 689 aaPredicted RBP15.9■□□□□ 0.14
SNX1-203ENST00000558040 TAS2R1Q9NYW7 299 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 C5AR2Q9P296 337 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 MAP10Q9P2G4 905 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 CES1P1Q9UKY3 287 aa15.9■□□□□ 0.14
SNX1-203ENST00000558040 A0A096LPI6 279 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 A0A1W2PRB8 838 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 ERAL1O75616 437 aaKnown RBP15.89■□□□□ 0.13
SNX1-203ENST00000558040 ANP32DO95626 131 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 CSNK2A2P19784 350 aaPredicted RBP15.89■□□□□ 0.13
SNX1-203ENST00000558040 ITGAXP20702 1163 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 AGXTP21549 392 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 SDHBP21912 280 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 XCR1P46094 333 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 MAPK10P53779 464 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 DCDP81605 110 aaKnown RBP15.89■□□□□ 0.13
SNX1-203ENST00000558040 PGAM4Q8N0Y7 254 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 GBP5Q96PP8 586 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 HOPXQ9BPY8 73 aaPredicted RBP15.89■□□□□ 0.13
SNX1-203ENST00000558040 ULBP3Q9BZM4 244 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 NEUROD4Q9HD90 331 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 MKKSQ9NPJ1 570 aaPredicted RBP15.89■□□□□ 0.13
SNX1-203ENST00000558040 TRPC4Q9UBN4 977 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 PISDQ9UG56 409 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 CROTQ9UKG9 612 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 TMEM184BQ9Y519 407 aaPredicted RBP15.89■□□□□ 0.13
SNX1-203ENST00000558040 EP300Q09472 2414 aaPredicted RBP15.89■□□□□ 0.13
SNX1-203ENST00000558040 DMDP11532 3685 aa15.89■□□□□ 0.13
SNX1-203ENST00000558040 PCNX2A6NKB5 2137 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 C15orf38-AP3S2A0A0A6YYH1 394 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 FAM227AF5H4B4 570 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 SCN2BO60939 215 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 NTRK1P04629 796 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 FHP07954 510 aa15.88■□□□□ 0.13
SNX1-203ENST00000558040 ITIH1P19827 911 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms