RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 LINC00303Q3SY05 128 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 SFT2D3Q587I9 215 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 GALNT18Q6P9A2 607 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 CLEC1AQ8NC01 280 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 OR2T11Q8NH01 316 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 ZNF75CPQ92670 426 aaPredicted RBP23.98■■□□□ 1.43
SMAD6-202ENST00000557916 C11orf24Q96F05 449 aaPredicted RBP23.98■■□□□ 1.43
SMAD6-202ENST00000557916 ARHGAP9Q9BRR9 750 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 TRIM55Q9BYV6 548 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 ZNF160Q9HCG1 818 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 ATP13A2Q9NQ11 1180 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 INTS9Q9NV88 658 aaKnown RBP23.98■■□□□ 1.43
SMAD6-202ENST00000557916 TEX10Q9NXF1 929 aaPredicted RBP23.98■■□□□ 1.43
SMAD6-202ENST00000557916 GNG14A0A1W2PPG7 69 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 NPIPB8E9PQR5 432 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 KLF11O14901 512 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 LDB3O75112 727 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 SEC22BO75396 215 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 PRKRAO75569 313 aaKnown RBP23.97■■□□□ 1.43
SMAD6-202ENST00000557916 DNAJB5O75953 348 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 TIA1P31483 386 aaKnown RBP eCLIP23.97■■□□□ 1.43
SMAD6-202ENST00000557916 TRA2BP62995 288 aaKnown RBP23.97■■□□□ 1.43
SMAD6-202ENST00000557916 ACTN3Q08043 901 aaPredicted RBP23.97■■□□□ 1.43
SMAD6-202ENST00000557916 STX4Q12846 297 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 DYDC1Q8WWB3 177 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 TANKQ92844 425 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 TM4SF18Q96CE8 201 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 METTL2AQ96IZ6 378 aaKnown RBP23.97■■□□□ 1.43
SMAD6-202ENST00000557916 CCT7Q99832 543 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 LRTM1Q9HBL6 345 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 C1orf109Q9NX04 203 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 CLDN16Q9Y5I7 305 aa23.97■■□□□ 1.43
SMAD6-202ENST00000557916 GLOD5A6NK44 160 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 TGFBR3LH3BV60 316 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 MYO1DO94832 1006 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 CCL11P51671 97 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 POLE2P56282 527 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 NDUFAF5Q5TEU4 345 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 TUBB6Q9BUF5 446 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 EBPLQ9BY08 206 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 PFDN4Q9NQP4 134 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 RIC8BQ9NVN3 520 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 PNPOQ9NVS9 261 aa23.96■■□□□ 1.43
SMAD6-202ENST00000557916 ERVH48-1M5A8F1 160 aa23.95■■□□□ 1.42
SMAD6-202ENST00000557916 SEC24DO94855 1032 aaPredicted RBP23.95■■□□□ 1.42
SMAD6-202ENST00000557916 ANXA4P09525 319 aaPredicted RBP23.95■■□□□ 1.42
SMAD6-202ENST00000557916 AIMP2Q13155 320 aaKnown RBP23.95■■□□□ 1.42
SMAD6-202ENST00000557916 XKR7Q5GH72 579 aa23.95■■□□□ 1.42
SMAD6-202ENST00000557916 FAM76AQ8TAV0 307 aa23.95■■□□□ 1.42
SMAD6-202ENST00000557916 UCN3Q969E3 161 aa23.95■■□□□ 1.42
SMAD6-202ENST00000557916 ANKRD9Q96BM1 317 aaPredicted RBP23.95■■□□□ 1.42
SMAD6-202ENST00000557916 WDR77Q9BQA1 342 aaPredicted RBP23.95■■□□□ 1.42
SMAD6-202ENST00000557916 ALOXE3Q9BYJ1 711 aa23.95■■□□□ 1.42
SMAD6-202ENST00000557916 MED4Q9NPJ6 270 aa23.95■■□□□ 1.42
SMAD6-202ENST00000557916 POLR3HQ9Y535 204 aaPredicted RBP23.95■■□□□ 1.42
SMAD6-202ENST00000557916 MYOCOSA0A1B0GUC4 107 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 LSM1O15116 133 aaKnown RBP23.94■■□□□ 1.42
SMAD6-202ENST00000557916 FGF17O60258 216 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 PPP2R1BP30154 601 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 TAS2R50P59544 299 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 OCRLQ01968 901 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 ID2Q02363 134 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 KIAA0040Q15053 153 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 PDCD2Q16342 344 aaPredicted RBP23.94■■□□□ 1.42
SMAD6-202ENST00000557916 GALNTL6Q49A17 601 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 NOXRED1Q6NXP6 359 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 PAPD4Q6PIY7 484 aaKnown RBP23.94■■□□□ 1.42
SMAD6-202ENST00000557916 OR4N5Q8IXE1 308 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 PARP9Q8IXQ6 854 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 LRRC8CQ8TDW0 803 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 C16orf78Q8WTQ4 265 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 C19orf60Q96EN9 201 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 IMMP1LQ96LU5 166 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 C3orf30Q96M34 536 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 LPAR4Q99677 370 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 CACNA1GO43497 2377 aa23.94■■□□□ 1.42
SMAD6-202ENST00000557916 ATP6AP2A0A1C7CYW4 349 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 SYNDIG1LA6NDD5 238 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 A6NL46 340 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 WASHC1A8K0Z3 465 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 A8MUA0 341 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 DYNC1I1O14576 645 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 PGRMC2O15173 223 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 ATP6AP2O75787 350 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 JUNP05412 331 aaKnown RBP23.93■■□□□ 1.42
SMAD6-202ENST00000557916 SERTAD2Q14140 314 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 OR52E8Q6IFG1 317 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 GALNT16Q8N428 558 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 PPP3R2Q96LZ3 170 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 FAIM2Q9BWQ8 316 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 PNO1Q9NRX1 252 aaKnown RBP23.93■■□□□ 1.42
SMAD6-202ENST00000557916 DLGAP4Q9Y2H0 992 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 PCDHA9Q9Y5H5 950 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 C1orf226A1L170 272 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 PEX11AO75192 247 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 IL3P08700 152 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 FAM87AP0C7U9 286 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 ICAM2P13598 275 aa23.93■■□□□ 1.42
SMAD6-202ENST00000557916 RPL38P63173 70 aaKnown RBP23.93■■□□□ 1.42
SMAD6-202ENST00000557916 FOLH1Q04609 750 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms