RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 LINC01553A4QN01 128 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 RNF222A6NCQ9 220 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 C5orf60A6NFR6 353 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 OR6C75A6NL08 312 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 DBX1A6NMT0 343 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 OR52A4PA6NMU1 304 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 A8MVM7 634 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 NPIPA2E9PIF3 369 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 WRBO00258 174 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 CCSO14618 274 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 LRRTM2O43300 516 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 NEMFO60524 1076 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 KCNJ13O60928 360 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 TM7SF2O76062 418 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 EML2O95834 649 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 IGLV2-14P01704 120 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 IGHEP01854 428 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 MT-ND2P03891 347 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 RHOXF2BP0C7M4 288 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 LINC00271P0C7V0 271 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 SLC2A3P11169 496 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 CTNNA2P26232 953 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 EPHA2P29317 976 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 CCT6AP40227 531 aaKnown RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 GRIA1P42261 906 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 RFX2P48378 723 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 LIMK2P53671 638 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 CDH11P55287 796 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 PRMT2P55345 433 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 HAND2P61296 217 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 PPIAP62937 165 aaKnown RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 ZXDAP98168 799 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 CDKL1Q00532 357 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 FGL1Q08830 312 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 HYAL1Q12794 435 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 TRAF2Q12933 501 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 DRP2Q13474 957 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 EXOSC2Q13868 293 aaKnown RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 GRB14Q14449 540 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 ARHGAP19Q14CB8 494 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 P2RY14Q15391 338 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 OR1C1Q15619 314 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 DPYSL2Q16555 572 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 HADHQ16836 314 aaKnown RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 ZSWIM7Q19AV6 140 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 PRTGQ2VWP7 1150 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 ZNF528Q3MIS6 628 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 GPR33Q49SQ1 333 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 DDI2Q5TDH0 399 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 TMEM225Q6GV28 225 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 TCEAL6Q6IPX3 200 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 CAPN13Q6MZZ7 669 aaPredicted RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 SLC18B1Q6NT16 456 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 FAM171BQ6P995 826 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 SYT10Q6XYQ8 523 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 RFPL4BQ6ZWI9 263 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 ASRGL1Q7L266 308 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 G2E3Q7L622 706 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 FJX1Q86VR8 437 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 GPBP1Q86WP2 473 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 TMEM219Q86XT9 240 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 PSTKQ8IV42 348 aaKnown RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 ODF3L1Q8IXM7 274 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 CCDC36Q8IYA8 594 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 ANKFN1Q8N957 763 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 DDHD1Q8NEL9 900 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 OR2T12Q8NG77 320 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 OR13C3Q8NGS6 347 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 SPATA22Q8NHS9 363 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 SLC22A8Q8TCC7 542 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 SLC2A14Q8TDB8 520 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 GRHL3Q8TE85 626 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 SPRYD4Q8WW59 207 aaPredicted RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 HSD17B8Q92506 261 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 P3H4Q92791 437 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 ZNF274Q96GC6 653 aaPredicted RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 SENP5Q96HI0 755 aaPredicted RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 INPP4AQ96PE3 977 aaPredicted RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 RHOXF2Q9BQY4 288 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 TMEM43Q9BTV4 400 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 KRTAP3-1Q9BYR8 98 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 POLD4Q9HCU8 107 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 S100A14Q9HCY8 104 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 SLC52A3Q9NQ40 469 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 AGPAT5Q9NUQ2 364 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 OR6C2Q9NZP2 312 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 DBF4Q9UBU7 674 aaPredicted RBP3.44□□□□□ -1.86
TDP1-217ENST00000557782 SEC14L3Q9UDX4 400 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 MIOXQ9UGB7 285 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 FBXL4Q9UKA2 621 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 MAN1B1Q9UKM7 699 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 CFAP45Q9UL16 551 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 NIP7Q9Y221 180 aaKnown RBP eCLIP3.44□□□□□ -1.86
TDP1-217ENST00000557782 OR1A2Q9Y585 309 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 PTGDR2Q9Y5Y4 395 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 SMCHD1A6NHR9 2005 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 MROH5Q6ZUA9 1318 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.43□□□□□ -1.86
TDP1-217ENST00000557782 IGLV5-39A0A0G2JS06 123 aa3.43□□□□□ -1.86
TDP1-217ENST00000557782 TRBV5-5A0A0J9YX44 114 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms