RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 TMEM99Q8N816 258 aa1.49□□□□□ -2.17
FOXN3-216ENST00000557496 KIR2DL5BQ8NHK3 375 aa1.49□□□□□ -2.17
FOXN3-216ENST00000557496 ZNF671Q8TAW3 534 aa1.49□□□□□ -2.17
FOXN3-216ENST00000557496 SNRNP27Q8WVK2 155 aaKnown RBP1.49□□□□□ -2.17
FOXN3-216ENST00000557496 CASD1Q96PB1 797 aa1.49□□□□□ -2.17
FOXN3-216ENST00000557496 TTYH2Q9BSA4 534 aa1.49□□□□□ -2.17
FOXN3-216ENST00000557496 S100A14Q9HCY8 104 aa1.49□□□□□ -2.17
FOXN3-216ENST00000557496 KLRF1Q9NZS2 232 aa1.49□□□□□ -2.17
FOXN3-216ENST00000557496 MLXQ9UH92 298 aa1.49□□□□□ -2.17
FOXN3-216ENST00000557496 NOCTQ9UK39 431 aaKnown RBP1.49□□□□□ -2.17
FOXN3-216ENST00000557496 TNRQ92752 1358 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 IGHV3OR16-12A0A075B7B8 117 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 PDXKO00764 312 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 MAGEB4O15481 346 aaPredicted RBP1.48□□□□□ -2.17
FOXN3-216ENST00000557496 LRP3O75074 770 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 MYBL1P10243 752 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 ACKR3P25106 362 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 ID1P41134 155 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 CRKLP46109 303 aaKnown RBP1.48□□□□□ -2.17
FOXN3-216ENST00000557496 LINC00315P59091 139 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 IFI35P80217 286 aaPredicted RBP1.48□□□□□ -2.17
FOXN3-216ENST00000557496 PRPF4BQ13523 1007 aaKnown RBP1.48□□□□□ -2.17
FOXN3-216ENST00000557496 CEACAM7Q14002 265 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 UGCGQ16739 394 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 ANKRD55Q3KP44 614 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 XKR4Q5GH76 650 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 OTPQ5XKR4 325 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 WDR25Q64LD2 544 aaPredicted RBP1.48□□□□□ -2.17
FOXN3-216ENST00000557496 IRGCQ6NXR0 463 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 ZNF730Q6ZMV8 503 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 PRPF39Q86UA1 669 aaKnown RBP1.48□□□□□ -2.17
FOXN3-216ENST00000557496 ZNF677Q86XU0 584 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 CACUL1Q86Y37 369 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 TDHQ8IZJ6 230 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 ARL14Q8N4G2 192 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 OR13F1Q8NGS4 319 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 GPR148Q8TDV2 347 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 RAD54LQ92698 747 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 ST6GALNAC6Q969X2 333 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 PGAP3Q96FM1 320 aaPredicted RBP1.48□□□□□ -2.17
FOXN3-216ENST00000557496 SIPA1Q96FS4 1042 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 TBX15Q96SF7 602 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 MTIF3Q9H2K0 278 aaKnown RBP1.48□□□□□ -2.17
FOXN3-216ENST00000557496 CUEDC2Q9H467 287 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 VIPAS39Q9H9C1 493 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 RAB9BQ9NP90 201 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 CYTL1Q9NRR1 136 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 IMPAD1Q9NX62 359 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 WDR35Q9P2L0 1181 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 KLHL21Q9UJP4 597 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 PCDHGA1Q9Y5H4 931 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 LIPGQ9Y5X9 500 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 TRIOBPQ9H2D6 2365 aa1.48□□□□□ -2.17
FOXN3-216ENST00000557496 NACAE9PAV3 2078 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 CDC42BPBQ9Y5S2 1711 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 RNF212BA8MTL3 300 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 TRIM49D1C9J1S8 452 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 DUSP11O75319 330 aaKnown RBP1.47□□□□□ -2.17
FOXN3-216ENST00000557496 GFPT2O94808 682 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 GJB5O95377 273 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 PRAMEF12O95522 483 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 CALCAP01258 141 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 SLC35E2P0CK97 266 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 LAMP1P11279 417 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 HSD17B1P14061 328 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 PPP2R1BP30154 601 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 P2RY4P51582 365 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 LCP2Q13094 533 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 SIM2Q14190 667 aaPredicted RBP1.47□□□□□ -2.17
FOXN3-216ENST00000557496 SLC17A1Q14916 467 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 ZNF776Q68DI1 518 aaPredicted RBP1.47□□□□□ -2.17
FOXN3-216ENST00000557496 GPR139Q6DWJ6 353 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 ABI3BPQ7Z7G0 1075 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 C14orf178Q8N769 122 aaPredicted RBP1.47□□□□□ -2.17
FOXN3-216ENST00000557496 OR1K1Q8NGR3 316 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 C16orf74Q96GX8 76 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 KIR2DL4Q99706 377 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 NAP1L4Q99733 375 aaKnown RBP1.47□□□□□ -2.17
FOXN3-216ENST00000557496 PRMT1Q99873 361 aaKnown RBP1.47□□□□□ -2.17
FOXN3-216ENST00000557496 RAB26Q9ULW5 256 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 CA5BQ9Y2D0 317 aa1.47□□□□□ -2.17
FOXN3-216ENST00000557496 ARHGAP23Q9P227 1491 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 A0A0B4J203 849 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 URADA6NGE7 173 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 EFCAB7A8K855 629 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 CCDC188H7C350 402 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 PPIP5K2O43314 1243 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 ACSL4O60488 711 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 DIAPH2O60879 1101 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 FCGR3BO75015 233 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 STARD3NLO95772 234 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 HSPB1P04792 205 aaKnown RBP1.46□□□□□ -2.18
FOXN3-216ENST00000557496 LYNP07948 512 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 LRRC63Q05C16 580 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 SHHQ15465 462 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 MICAQ29983 383 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 QRICH1Q2TAL8 776 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 C6orf136Q5SQH8 315 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 AGBL2Q5U5Z8 902 aa1.46□□□□□ -2.18
FOXN3-216ENST00000557496 MZT2BQ6NZ67 158 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms