RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 ZCCHC7Q8N3Z6 543 aaKnown RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 C11orf65Q8NCR3 313 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 FLCNQ8NFG4 579 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 CADM4Q8NFZ8 388 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 OR2L5Q8NG80 312 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 OR13H1Q8NG92 308 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 OR52N2Q8NGI0 321 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 MAFAQ8NHW3 353 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 OR5P2Q8WZ92 322 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ZBED6CLQ96FA7 236 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ALPK1Q96QP1 1244 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 F2RL3Q96RI0 385 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 SEPHS2Q99611 448 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ZNF717Q9BY31 904 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ASPSCR1Q9BZE9 553 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 SLC6A20Q9NP91 592 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 LTB4R2Q9NPC1 389 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 CD93Q9NPY3 652 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ACSS1Q9NUB1 689 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 THUMPD1Q9NXG2 353 aaKnown RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 IFT80Q9P2H3 777 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 DAPK2Q9UIK4 370 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 KLK4Q9Y5K2 254 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 IGKV1-8A0A0C4DH67 115 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 FEZF1A0PJY2 475 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 SAGE2PA6NJ88 616 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 FAM47E-STBD1D6RA91 191 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 M0QX08 132 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 RGS13O14921 159 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 PDPK1O15530 556 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ZW10O43264 779 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 TPST1O60507 370 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 NDUFS2O75306 463 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 KCNK5O95279 499 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 IFNA14P01570 189 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 THEGLP0DJG4 465 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 CTSEP14091 401 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 CKMT2P17540 419 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ITIH1P19827 911 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ZNF10P21506 573 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 UQCRC2P22695 453 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 AK4P27144 223 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 CD40LGP29965 261 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 PCGF2P35227 344 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ITGADQ13349 1161 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 SLC9A5Q14940 896 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 MLC1Q15049 377 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 CCDC85BQ15834 202 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 TMEM26Q6ZUK4 368 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ZZZ3Q8IYH5 903 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 CAMKK1Q8N5S9 505 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 TANKQ92844 425 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 TBC1D20Q96BZ9 403 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 TM4SF18Q96CE8 201 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 KLHDC7BQ96G42 594 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 PYURFQ96I23 114 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 IER2Q9BTL4 223 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 GPR174Q9BXC1 333 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 NLNQ9BYT8 704 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 TMEM38AQ9H6F2 299 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 LYARQ9NX58 379 aaKnown RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 ZNF624Q9P2J8 865 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 KLHL3Q9UH77 587 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 FBXL21Q9UKT6 434 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 USP22Q9UPT9 525 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 EXO1Q9UQ84 846 aaKnown RBP12.03□□□□□ -0.48
SHMT2-229ENST00000557348 CA5BQ9Y2D0 317 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 BTBD3Q9Y2F9 522 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 NAALAD2Q9Y3Q0 740 aa12.03□□□□□ -0.48
SHMT2-229ENST00000557348 PCM1Q15154 2024 aa12.02□□□□□ -0.48
SHMT2-229ENST00000557348 A0A0A6YYD5 115 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 A0A1B0GTW7 788 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 TNFSF14O43557 240 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 TBX6O95947 436 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-229ENST00000557348 SERPINA1P01009 418 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 SLC35G6P0C7Q6 338 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 BCL6P41182 706 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 SLC19A1P41440 591 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 FRKP42685 505 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-229ENST00000557348 ATP1A4Q13733 1029 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 DGUOKQ16854 277 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 SLC5A12Q1EHB4 618 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 ZNF385BQ569K4 471 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 TPRG1LQ5T0D9 272 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 ZDHHC13Q8IUH4 622 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 EPHX4Q8IUS5 362 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.02□□□□□ -0.49
SHMT2-229ENST00000557348 ADGRF3Q8IZF5 1079 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 ZNF655Q8N720 491 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-229ENST00000557348 OR4E2Q8NGC2 313 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 FBXO30Q8TB52 745 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 SLC35A5Q9BS91 424 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 EPS8L2Q9H6S3 715 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 AKIP1Q9NQ31 210 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 PRDM9Q9NQV7 894 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 ADPRHL2Q9NX46 363 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 TAAR2Q9P1P5 351 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 BAG5Q9UL15 447 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 CA14Q9ULX7 337 aa12.02□□□□□ -0.49
SHMT2-229ENST00000557348 OAZ3Q9UMX2 235 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms