RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PINLYPA6NC86 204 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 K7EPI3 171 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 ACOT7O00154 380 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 RTCAO00442 366 aaKnown RBP14.73□□□□□ -0.05
TUBB3-213ENST00000557262 FAM155BO75949 473 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 SCELO95171 688 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 PCNAP12004 261 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 CAPN3P20807 821 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 HIST1H1TP22492 207 aaPredicted RBP14.73□□□□□ -0.05
TUBB3-213ENST00000557262 CPN2P22792 545 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 CRABP2P29373 138 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 SERPINB1P30740 379 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 GMPRP36959 345 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 PLTPP55058 493 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 CAV1Q03135 178 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 DLG1Q12959 904 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 BIKQ13323 160 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 DEPDC1Q5TB30 811 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 NDUFAF5Q5TEU4 345 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 OPN5Q6U736 354 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 RTL4Q6ZR62 310 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 TBC1D1Q86TI0 1168 aaPredicted RBP14.73□□□□□ -0.05
TUBB3-213ENST00000557262 MARVELD2Q8N4S9 558 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 ZNF321PQ8N8H1 164 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 OR7G3Q8NG95 312 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 SLC2A12Q8TD20 617 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 SREK1Q8WXA9 508 aaKnown RBP14.73□□□□□ -0.05
TUBB3-213ENST00000557262 ANP32BQ92688 251 aaKnown RBP14.73□□□□□ -0.05
TUBB3-213ENST00000557262 CMTM7Q96FZ5 175 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 SGCZQ96LD1 299 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 ATOH8Q96SQ7 321 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 OPTCQ9UBM4 332 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 PYCARDQ9ULZ3 195 aa14.73□□□□□ -0.05
TUBB3-213ENST00000557262 UTP11Q9Y3A2 253 aaKnown RBP14.73□□□□□ -0.05
TUBB3-213ENST00000557262 TEP1Q99973 2627 aaKnown RBP14.73□□□□□ -0.05
TUBB3-213ENST00000557262 SUPT3HB4E1H0 165 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 KERAO60938 352 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 SH3BGRLO75368 114 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 SUPT3HO75486 399 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 ETHE1O95571 254 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 LTA4HP09960 611 aaKnown RBP14.72□□□□□ -0.05
TUBB3-213ENST00000557262 SLC35E2BP0CK96 405 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 MAGEA4P43358 317 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 ID2Q02363 134 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 GXYLT1Q4G148 440 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 EMC4Q5J8M3 183 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 KHDRBS2Q5VWX1 349 aaKnown RBP14.72□□□□□ -0.05
TUBB3-213ENST00000557262 OR4C11Q6IEV9 310 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 MEX3BQ6ZN04 569 aaKnown RBP14.72□□□□□ -0.05
TUBB3-213ENST00000557262 GK5Q6ZS86 529 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 CMC1Q7Z7K0 106 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 SLC22A16Q86VW1 577 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 GOLM1Q8NBJ4 401 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 LILRB4Q8NHJ6 448 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 ZNF721Q8TF20 911 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 CHTF18Q8WVB6 975 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 RND1Q92730 232 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 RBM18Q96H35 190 aaKnown RBP14.72□□□□□ -0.05
TUBB3-213ENST00000557262 SCYL1Q96KG9 808 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 FAM173AQ9BQD7 235 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 TTTY12Q9BZ98 90 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 ZDHHC11Q9H8X9 412 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 IGSF5Q9NSI5 407 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 MS4A12Q9NXJ0 267 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 COPS7AQ9UBW8 275 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 ACOT9Q9Y305 439 aa14.72□□□□□ -0.05
TUBB3-213ENST00000557262 FAM166BA8MTA8 275 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 NPIPA2E9PIF3 369 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 NPIPA3F8WFD2 350 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 UBXN8O00124 270 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 SAP18O00422 153 aaKnown RBP14.71□□□□□ -0.05
TUBB3-213ENST00000557262 GLSO94925 669 aaPredicted RBP14.71□□□□□ -0.05
TUBB3-213ENST00000557262 COX7A2P14406 83 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 EPB42P16452 691 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 STX2P32856 288 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 SSR2P43308 183 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 STT3AP46977 705 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 NR0B1P51843 470 aaKnown RBP14.71□□□□□ -0.05
TUBB3-213ENST00000557262 IGLV3-21P80748 117 aaPredicted RBP14.71□□□□□ -0.05
TUBB3-213ENST00000557262 C2orf54Q08AI8 447 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 SLAMF1Q13291 335 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 SLMAPQ14BN4 828 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 MPEG1Q2M385 716 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 PIGGQ5H8A4 983 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 GRHL2Q6ISB3 625 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 CCDC25Q86WR0 208 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 OR4N5Q8IXE1 308 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 FBF1Q8TES7 1133 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 UBTD2Q8WUN7 234 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 RGMAQ96B86 450 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 NXNL1Q96CM4 212 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 SENP5Q96HI0 755 aaPredicted RBP14.71□□□□□ -0.05
TUBB3-213ENST00000557262 TREX2Q9BQ50 279 aaPredicted RBP14.71□□□□□ -0.05
TUBB3-213ENST00000557262 OR51B5Q9H339 312 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 RPF2Q9H7B2 306 aaKnown RBP14.71□□□□□ -0.05
TUBB3-213ENST00000557262 IL1RL2Q9HB29 575 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 SACM1LQ9NTJ5 587 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 RNF6Q9Y252 685 aa14.71□□□□□ -0.05
TUBB3-213ENST00000557262 OR14I1A6ND48 311 aa14.7□□□□□ -0.06
TUBB3-213ENST00000557262 G3V3Y1 287 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms