RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 C3P1Q6ZMU1 363 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 CEP128Q6ZU80 1094 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 NCCRP1Q6ZVX7 275 aaPredicted RBP8.05□□□□□ -1.12
VRK1-206ENST00000557222 SLC22A16Q86VW1 577 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 ZNF595Q8IYB9 648 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 CA13Q8N1Q1 262 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 TMEM132CQ8N3T6 1108 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 ANKRD53Q8N9V6 530 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 OR8K3Q8NH51 312 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 NINJ1Q92982 152 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 GAL3ST3Q96A11 431 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 PYCR2Q96C36 320 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 NDNQ99608 321 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 ZNF559Q9BR84 538 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 NT5DC2Q9H857 520 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 ADAP2Q9NPF8 381 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 FBXW2Q9UKT8 454 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 EDARQ9UNE0 448 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 MRPS33Q9Y291 106 aaKnown RBP8.05□□□□□ -1.12
VRK1-206ENST00000557222 VWA7Q9Y334 891 aa8.05□□□□□ -1.12
VRK1-206ENST00000557222 A8MVJ9 347 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 FAM47E-STBD1D6RA91 191 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 KLK8O60259 260 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 CDC40O60508 579 aaKnown RBP eCLIP8.04□□□□□ -1.12
VRK1-206ENST00000557222 H2AFYO75367 372 aaKnown RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 MYO1DO94832 1006 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 IGHG3P01860 377 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 F7P08709 466 aaPredicted RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 CNR1P21554 472 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 CXCR5P32302 372 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 FNTAP49354 379 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 TERF1P54274 439 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 RAB8AP61006 207 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 PPIAP62937 165 aaKnown RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 TBL3Q12788 808 aaKnown RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 CDK5R2Q13319 367 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 EFTUD2Q15029 972 aaKnown RBP eCLIP8.04□□□□□ -1.125e-7■■■□□ 16.3
VRK1-206ENST00000557222 ELAVL1Q15717 326 aaKnown RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 HYAL4Q2M3T9 481 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 GXYLT1Q4G148 440 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 RBM20Q5T481 1227 aaKnown RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 TEDDM1Q5T9Z0 273 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 RNASEH2BQ5TBB1 312 aaKnown RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 HECTD2Q5U5R9 776 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 FAM45BPQ6NSW5 357 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 SBSNQ6UWP8 590 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 MDGA2Q7Z553 956 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 THOC6Q86W42 341 aaKnown RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 KLHDC8AQ8IYD2 350 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 SPC24Q8NBT2 197 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 MORN4Q8NDC4 146 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 PSD4Q8NDX1 1056 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 OR52N2Q8NGI0 321 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 FAM45AQ8TCE6 357 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 DAZLQ92904 295 aaKnown RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 FAR2Q96K12 515 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 SGCZQ96LD1 299 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 FOXC2Q99958 501 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 CAPS2Q9BXY5 557 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 CXXC4Q9H2H0 198 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 SPNS1Q9H2V7 528 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 LZTFL1Q9NQ48 299 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 PRTFDC1Q9NRG1 225 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 HPF1Q9NWY4 346 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 MYOTQ9UBF9 498 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 ADGRE2Q9UHX3 823 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 ZNF223Q9UK11 482 aaPredicted RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 ERVK-11Q9UQG0 969 aa8.04□□□□□ -1.12
VRK1-206ENST00000557222 PRRC2AP48634 2157 aaKnown RBP8.04□□□□□ -1.12
VRK1-206ENST00000557222 FLNAP21333 2647 aaKnown RBP8.03□□□□□ -1.12
VRK1-206ENST00000557222 LRIT2A6NDA9 550 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 TMEM200CA6NKL6 621 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 A8MUA0 341 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 AQP7O14520 342 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 ZNHIT1O43257 154 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 B3GALT2O43825 422 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 SUSD5O60279 629 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 HCN1O60741 890 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 WDR1O75083 606 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 FBXO24O75426 580 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 GLSO94925 669 aaPredicted RBP8.03□□□□□ -1.12
VRK1-206ENST00000557222 GUCA1CO95843 209 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 C1GALT1C1LP0DN25 315 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 GNAZP19086 355 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 ACVR2AP27037 513 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 DNAJA1P31689 397 aaKnown RBP8.03□□□□□ -1.12
VRK1-206ENST00000557222 ZFP36L2P47974 494 aaKnown RBP8.03□□□□□ -1.12
VRK1-206ENST00000557222 ART1P52961 327 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 RAB38P57729 211 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 NUP107P57740 925 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 BTN3A2P78410 334 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 FOLH1Q04609 750 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 PMPCAQ10713 525 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 BIKQ13323 160 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 FRG1Q14331 258 aaKnown RBP8.03□□□□□ -1.12
VRK1-206ENST00000557222 RBBP5Q15291 538 aaKnown RBP8.03□□□□□ -1.12
VRK1-206ENST00000557222 PPP1R3AQ16821 1122 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 SLC25A35Q3KQZ1 300 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 ADPRMQ3LIE5 342 aa8.03□□□□□ -1.12
VRK1-206ENST00000557222 TOR1AIP1Q5JTV8 583 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms