RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ZNF547Q8IVP9 402 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 SFTPA1Q8IWL2 248 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 AQP12AQ8IXF9 295 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 SLC15A3Q8IY34 581 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 SYTL1Q8IYJ3 562 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TBC1D3Q8IZP1 549 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 RAB42Q8N4Z0 105 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 DCBLD1Q8N8Z6 715 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 IL17RCQ8NAC3 791 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 SMRP1Q8NCR6 262 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CATSPER1Q8NEC5 780 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 VPS37AQ8NEZ2 397 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TNIP2Q8NFZ5 429 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 OR56A1Q8NGH5 318 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 OR9I1Q8NGQ6 314 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 OR14C36Q8NHC7 312 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 STARD8Q92502 1023 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 TFGQ92734 400 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 NELL1Q92832 810 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 DNASE1L2Q92874 299 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 FAM131CQ96AQ9 280 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 VPS33AQ96AX1 596 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 PYCR2Q96C36 320 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CCDC124Q96CT7 223 aaKnown RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 MTFMTQ96DP5 389 aaKnown RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 WDR34Q96EX3 536 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 MED8Q96G25 268 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 DUS3LQ96G46 650 aaKnown RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 MSANTD3Q96H12 275 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CDX2Q99626 313 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 PRPF18Q99633 342 aaKnown RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 HAUS8Q9BT25 410 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 EFCAB11Q9BUY7 163 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 C1orf50Q9BV19 199 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 ALOXE3Q9BYJ1 711 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 DPY30Q9C005 99 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 KLHL4Q9C0H6 718 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 ATG10Q9H0Y0 220 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 KLK15Q9H2R5 256 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 RMND5AQ9H871 391 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 BRF2Q9HAW0 419 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 IL1RL2Q9HB29 575 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 PREBQ9HCU5 417 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 STOX2Q9P2F5 926 aaPredicted RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 VPS29Q9UBQ0 182 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 GIMAP2Q9UG22 337 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CD207Q9UJ71 328 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 FZD4Q9ULV1 537 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 CLCA2Q9UQC9 943 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 WBP11Q9Y2W2 641 aaKnown RBP4.27□□□□□ -1.73
SRP54-212ENST00000556992 AP4S1Q9Y587 144 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 MTCH2Q9Y6C9 303 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 PIAS3Q9Y6X2 628 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 PATJQ8NI35 1801 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 EPG5Q9HCE0 2579 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 VWA8A3KMH1 1905 aa4.27□□□□□ -1.73
SRP54-212ENST00000556992 FNDC1Q4ZHG4 1894 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 TANC1Q9C0D5 1861 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 LTBP2Q14767 1821 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 A0A1W2PQF6 199 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 PRORSD1PA6NEY8 169 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 LRRC72A6NJI9 287 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 H0YJX3 145 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 H3BNX3 289 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 CACNB4O00305 520 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 TOR1BO14657 336 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 HNRNPRO43390 633 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 PLRG1O43660 514 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 ERN1O75460 977 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 PCCBP05166 539 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 LPLP06858 475 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SLC35G4P0C7Q5 338 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 UMPSP11172 480 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 MYCLP1P12525 358 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 HOXB2P14652 356 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 TCN1P20061 433 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 ATP6V1C1P21283 382 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 IDSP22304 550 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 PBLDP30039 288 aaPredicted RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 SERPINB1P30740 379 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SLC7A1P30825 629 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 S100A3P33764 101 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 PIK3CBP42338 1070 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ASMTP46597 345 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 TRPC1P48995 793 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 HTR6P50406 440 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SLC7A2P52569 658 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 HNRNPFP52597 415 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 NRG3P56975 720 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 SESN3P58005 492 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 RAP2BP61225 183 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 RPL38P63173 70 aaKnown RBP4.26□□□□□ -1.73
SRP54-212ENST00000556992 PHEXP78562 749 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 HMGCS1Q01581 520 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 TAP2Q03519 686 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 LIPEQ05469 1076 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 ACSM2AQ08AH3 577 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 DMPKQ09013 629 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 E2F2Q14209 437 aa4.26□□□□□ -1.73
SRP54-212ENST00000556992 LRRC32Q14392 662 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms