RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 GRK7Q8WTQ7 553 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 SREK1Q8WXA9 508 aaKnown RBP10.97□□□□□ -0.65
ACTN1-221ENST00000556571 CCT6BQ92526 530 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 KIAA1191Q96A73 305 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 QRFPRQ96P65 431 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 SERINC2Q96SA4 455 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 SH3GL2Q99962 352 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 ACKR4Q9NPB9 350 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 SPRR3Q9UBC9 169 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 ZNF629Q9UEG4 869 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-221ENST00000556571 PYCARDQ9ULZ3 195 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 DAPP1Q9UN19 280 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 VWA7Q9Y334 891 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 CSPG4Q6UVK1 2322 aa10.97□□□□□ -0.65
ACTN1-221ENST00000556571 FN1P02751 2386 aaKnown RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 TUBAL3A6NHL2 446 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 AHRRA9YTQ3 701 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 C17orf105B2RV13 164 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 ZNF354AO60765 605 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 CLEC3AO75596 197 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 INHBBP09529 407 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 EPXP11678 715 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 BMP5P22003 454 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 ADSLP30566 484 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 HOXC12P31275 282 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 PIGAP37287 484 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 HNMTP50135 292 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 PLA2G16P53816 162 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 MTTPP55157 894 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 KCNJ2P63252 427 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 CDKL1Q00532 357 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 PPP1R3AQ16821 1122 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 ADPRMQ3LIE5 342 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 PIGGQ5H8A4 983 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 TTC27Q6P3X3 843 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 TRIM40Q6P9F5 258 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 CCDC137Q6PK04 289 aaKnown RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 SLCO4C1Q6ZQN7 724 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 SEM1Q6ZVN7 128 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 Q71RC1 249 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 TAOK1Q7L7X3 1001 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 MAATS1Q7Z4T9 603 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 KIF18BQ86Y91 864 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 KRT78Q8N1N4 520 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 ZNF321PQ8N8H1 164 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 RELL2Q8NC24 303 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 C7orf57Q8NEG2 295 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 OR2L5Q8NG80 312 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 NEIL3Q8TAT5 605 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 SLC2A12Q8TD20 617 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 ANKRD7Q92527 254 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 NAPGQ99747 312 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 SMR3AQ99954 134 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 PITHD1Q9GZP4 211 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 REXO4Q9GZR2 422 aaKnown RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 NT5DC2Q9H857 520 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 NEUROD4Q9HD90 331 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 ZFP64Q9NPA5 681 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 QPCTLQ9NXS2 382 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 COPS7AQ9UBW8 275 aa10.96□□□□□ -0.65
ACTN1-221ENST00000556571 CORO1CQ9ULV4 474 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 BOKQ9UMX3 212 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-221ENST00000556571 MYOCOSA0A1B0GUC4 107 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 ANKDD1BA6NHY2 528 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 FAM171A2A8MVW0 826 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 GOSR1O95249 250 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 EPPINO95925 133 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 RFPL3SP0C7P2 107 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 TACR1P25103 407 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 CERS1P27544 350 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 CEACAM8P31997 349 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-221ENST00000556571 TIMP3P35625 211 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 FNTAP49354 379 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 PGGT1BP53609 377 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 TGM3Q08188 693 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 ASPHQ12797 758 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 SLBPQ14493 270 aaKnown RBP eCLIP10.95□□□□□ -0.66
ACTN1-221ENST00000556571 PPP1R7Q15435 360 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 ZNF791Q3KP31 576 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-221ENST00000556571 SPANXN3Q5MJ09 141 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 FAM45BPQ6NSW5 357 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 ABHD17CQ6PCB6 329 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 CLEC9AQ6UXN8 241 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 PPIL6Q8IXY8 311 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 LRRC25Q8N386 305 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-221ENST00000556571 LIX1Q8N485 282 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 TNIP2Q8NFZ5 429 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 NUBPLQ8TB37 319 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 FAM45AQ8TCE6 357 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 PAQR8Q8TEZ7 354 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 CSF3RQ99062 836 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 EGFL8Q99944 293 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 NAT9Q9BTE0 207 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 CAPS2Q9BXY5 557 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 ZNF703Q9H7S9 590 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-221ENST00000556571 PLEKHF2Q9H8W4 249 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 COPS7BQ9H9Q2 264 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-221ENST00000556571 SH2D2AQ9NP31 389 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 IKZF3Q9UKT9 509 aa10.95□□□□□ -0.66
ACTN1-221ENST00000556571 SAR1BQ9Y6B6 198 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms