RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 DUPD1Q68J44 220 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 ABHD17CQ6PCB6 329 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 QSOX2Q6ZRP7 698 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 ZNF740Q8NDX6 193 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 LILRB4Q8NHJ6 448 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 FAM57AQ8TBR7 257 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 EEF1AKMT1Q8WVE0 214 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 MAGOHBQ96A72 148 aaKnown RBP9.34□□□□□ -0.91
SCFD1-220ENST00000556486 TBC1D20Q96BZ9 403 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 MACROD1Q9BQ69 325 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 NAT9Q9BTE0 207 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 GFOD1Q9NXC2 390 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 KCNN3Q9UGI6 736 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 SF3B6Q9Y3B4 125 aaKnown RBP9.34□□□□□ -0.91
SCFD1-220ENST00000556486 JMJD1CQ15652 2540 aa9.34□□□□□ -0.91
SCFD1-220ENST00000556486 FN1P02751 2386 aaKnown RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 IGKV3D-11A0A0A0MRZ8 115 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 FEZF1A0PJY2 475 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 TFECO14948 347 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 HS6ST1O60243 411 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 NME2P1O60361 137 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 CDC123O75794 336 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 PRKD3O94806 890 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 SLITRK5O94991 958 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 F7P08709 466 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 ENO2P09104 434 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 CDH1P12830 882 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 ALOX12P18054 663 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 PGAM1P18669 254 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 DNASE1P24855 282 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 ADSLP30566 484 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 CHRNB4P30926 498 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 AHRP35869 848 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 FNTAP49354 379 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 DLX5P56178 289 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 NUP107P57740 925 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 TAS2R50P59544 299 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 IL2P60568 153 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 CRYMQ14894 314 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 TERF2Q15554 542 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 KCTD19Q17RG1 926 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 RNASEH2BQ5TBB1 312 aaKnown RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 SLC25A25Q6KCM7 469 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 CCDC137Q6PK04 289 aaKnown RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 PAQR3Q6TCH7 311 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 MBOAT1Q6ZNC8 495 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 RPS19BP1Q86WX3 136 aaKnown RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 PALM2Q8IXS6 379 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 PPIL6Q8IXY8 311 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 KIF2BQ8N4N8 673 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 POGLUT1Q8NBL1 392 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 FAM98AQ8NCA5 519 aaKnown RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 GABPB2Q8TAK5 448 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 ZCCHC10Q8TBK6 192 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 NT5CQ8TCD5 201 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 ASB5Q8WWX0 329 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 ATL1Q8WXF7 558 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 RND1Q92730 232 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 TSLPQ969D9 159 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 RMND5BQ96G75 393 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 SNF8Q96H20 258 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 PDLIM5Q96HC4 596 aaKnown RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 PBKQ96KB5 322 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 OR4K3Q96R72 315 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 NAP1L3Q99457 506 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 ATG10Q9H0Y0 220 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 CDCP1Q9H5V8 836 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 ZFP69BQ9UJL9 534 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 CORO1CQ9ULV4 474 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 PPIEQ9UNP9 301 aaKnown RBP9.33□□□□□ -0.92
SCFD1-220ENST00000556486 JRKLQ9Y4A0 524 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 MAD1L1Q9Y6D9 718 aa9.33□□□□□ -0.92
SCFD1-220ENST00000556486 RTTNQ86VV8 2226 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 SHISA8B8ZZ34 492 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 GOLGA8MH3BSY2 632 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 NDUFS4O43181 175 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 CTAG2O75638 210 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 AHSGP02765 367 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 HIST1H2AGP0C0S8 130 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-220ENST00000556486 SMIM10L1P0DMW3 83 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 HIST1H2ADP20671 130 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 PCSK6P29122 969 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 CDKN2DP55273 166 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 OR4D2P58180 307 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 GPR85P60893 370 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 ACTN3Q08043 901 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-220ENST00000556486 DPY19L1Q2PZI1 675 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 GFOD2Q3B7J2 385 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 DEFB134Q4QY38 66 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 EMC4Q5J8M3 183 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 FDX2Q6P4F2 183 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 CLEC9AQ6UXN8 241 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 FKBP9P1Q75LS8 142 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 ABHD13Q7L211 337 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 MTDHQ86UE4 582 aaKnown RBP9.32□□□□□ -0.92
SCFD1-220ENST00000556486 EID3Q8N140 333 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 TBC1D19Q8N5T2 526 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 NFAM1Q8NET5 270 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-220ENST00000556486 OR5T3Q8NGG3 340 aa9.32□□□□□ -0.92
SCFD1-220ENST00000556486 OR5M9Q8NGP3 310 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms