RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 LIX1Q8N485 282 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ZBTB2Q8N680 514 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ARL10Q8N8L6 244 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 HJURPQ8NCD3 748 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF548Q8NEK5 533 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-241ENST00000556374 BPIFB6Q8NFQ5 453 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 OR10H5Q8NGA6 315 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 OR52B6Q8NGF0 335 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 OR52E4Q8NGH9 312 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 OR2T11Q8NH01 316 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 CSGALNACT1Q8TDX6 532 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 CHPT1Q8WUD6 406 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 UBTD2Q8WUN7 234 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF480Q8WV37 535 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 EEF1AKMT1Q8WVE0 214 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 SKA2Q8WVK7 121 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-241ENST00000556374 MUL1Q969V5 352 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 PDLIM5Q96HC4 596 aaKnown RBP4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF641Q96N77 438 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-241ENST00000556374 DACH2Q96NX9 599 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 OR52E6Q96RD3 313 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 H2AFJQ9BTM1 129 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 RIBC2Q9H4K1 309 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 GPN2Q9H9Y4 310 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ZFP14Q9HCL3 533 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 EMC7Q9NPA0 242 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 TMEM74BQ9NUR3 256 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 C1orf109Q9NX04 203 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 KCTD5Q9NXV2 234 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ASIC5Q9NY37 505 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 SELENONQ9NZV5 590 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF639Q9UID6 485 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ENPP5Q9UJA9 477 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF490Q9ULM2 529 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ERVW-1Q9UQF0 538 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ERGIC3Q9Y282 383 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 WDR37Q9Y2I8 494 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 TDRKHQ9Y2W6 561 aaKnown RBP4.23□□□□□ -1.73
ATXN3-241ENST00000556374 DHRS7Q9Y394 339 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 TMED5Q9Y3A6 229 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 GMPPBQ9Y5P6 360 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ZFP37Q9Y6Q3 630 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-241ENST00000556374 HSPE1-MOB4S4R3N1 261 aa4.23□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF106Q9H2Y7 1883 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 WDR87Q6ZQQ6 2873 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GLYATL1P3A0A0U1RQE8 302 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 LOC100130705A0A1B0GUX0 176 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 FAM92AA1XBS5 289 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 MYO1GB0I1T2 1018 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ANKRD66B4E2M5 251 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 LEFTY2O00292 366 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 EIF3FO00303 357 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PPP6CO00743 305 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DLGAP1O14490 977 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 RFXANKO14593 260 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 MAGEB3O15480 346 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ZSCAN9O15535 394 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 RGS10O43665 173 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DFNA5O60443 496 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SOCS5O75159 536 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CNOT3O75175 753 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 TMEM127O75204 238 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 NDUFS2O75306 463 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ATP6V1G1O75348 118 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CREG1O75629 220 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GJB3O75712 270 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PRKD3O94806 890 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PRSS23O95084 383 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GABARAPO95166 117 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CCNDBP1O95273 360 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GJB5O95377 273 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CLDN9O95484 217 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 LATS1O95835 1130 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CFIP05156 583 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 FABP3P05413 133 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 C8GP07360 202 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 OR56A5P0C7T3 313 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PRSS56P0CW18 603 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF182P17025 639 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 IL1RNP18510 177 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ITGB6P18564 788 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 FPR1P21462 350 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CRHBPP24387 322 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DDX6P26196 483 aaKnown RBP eCLIP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SERPINA4P29622 427 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 MAGEA8P43361 318 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 NRIP1P48552 1158 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PCYT1AP49585 367 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 TMED10P49755 219 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CLK1P49759 484 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 EIF2B2P49770 351 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 BCAP31P51572 246 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DGKQP52824 942 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PLA2G16P53816 162 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CLRN1P58418 232 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CSNK2BP67870 215 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PPP2R2BQ00005 443 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PLIN5Q00G26 463 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DSC1Q08554 894 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DMWDQ09019 674 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms