RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 KIF5CO60282 957 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 RDH16O75452 317 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ATP6AP2O75787 350 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 EPPINO95925 133 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 STATHP02808 62 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 CNR1P21554 472 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 VAMP1P23763 118 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 TIMP3P35625 211 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 MAGEA5P43359 124 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 SSR4P51571 173 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 CLCN2P51788 898 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ABATP80404 500 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 TRIM14Q14142 442 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 POU6F1Q14863 301 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ARHGAP19Q14CB8 494 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 TMED2Q15363 201 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ACKR1Q16570 336 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 HYAL4Q2M3T9 481 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ANKRD20A4Q4UJ75 823 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ANKRD20A2Q5SQ80 823 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ANKRD20A1Q5TYW2 823 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ANKRD20A3Q5VUR7 823 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ICE2Q659A1 982 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 KIAA0930Q6ICG6 404 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-236ENST00000556220 VN1R4Q7Z5H5 301 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ADCK2Q7Z695 626 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 PDSS2Q86YH6 399 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 HIPK1Q86Z02 1210 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 GPALPP1Q8IXQ4 340 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 KLHDC8BQ8IXV7 354 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ULK2Q8IYT8 1036 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 KRT222Q8N1A0 295 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 APCDD1LQ8NCL9 501 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 TNIP2Q8NFZ5 429 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 CTNNBL1Q8WYA6 563 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-236ENST00000556220 KIAA1191Q96A73 305 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 TBC1D20Q96BZ9 403 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 LRRC45Q96CN5 670 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 HAUS1Q96CS2 278 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 CCDC138Q96M89 665 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 PPP1R2P1Q96PQ5 205 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 PANX2Q96RD6 677 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 EBNA1BP2Q99848 306 aaKnown RBP6.32□□□□□ -1.4
ATXN3-236ENST00000556220 MACROD1Q9BQ69 325 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 LDAHQ9H6V9 325 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 HPF1Q9NWY4 346 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 TRMT1Q9NXH9 659 aaKnown RBP6.32□□□□□ -1.4
ATXN3-236ENST00000556220 TAC3Q9UHF0 121 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 FBXW2Q9UKT8 454 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ERVK-11Q9UQG0 969 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 DRG1Q9Y295 367 aaKnown RBP6.32□□□□□ -1.4
ATXN3-236ENST00000556220 YARS2Q9Y2Z4 477 aaKnown RBP6.32□□□□□ -1.4
ATXN3-236ENST00000556220 PCDHA3Q9Y5H8 950 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 NPFFR2Q9Y5X5 522 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 PMF1-BGLAPU3KQ54 211 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 TRGV5A0A0B4J1U4 118 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 A0A0G2JMM0 328 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 TRBV11-1A0A0K0K1C0 115 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 A0A1W2PPB8 328 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 A0A1W2PRS3 328 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 KIR3DP1A8MWS1 328 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 AHRRA9YTQ3 701 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 AKR1B15C9JRZ8 316 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 H7BY64 318 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 H7C0C1 242 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 MYO1CO00159 1063 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 PRMT5O14744 637 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 CASKO14936 926 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 GOT2P00505 430 aaKnown RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 FHP07954 510 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 TNNT1P13805 278 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 FPR1P21462 350 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 HSD17B2P37059 387 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 PPARGP37231 505 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 SLC1A1P43005 524 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 ATP5OP48047 213 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 ZNF136P52737 540 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 RUNX1T1Q06455 604 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 DMTNQ08495 405 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 FOXO1Q12778 655 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 TSTA3Q13630 321 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 KCTD19Q17RG1 926 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 CCDC38Q502W7 563 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 XKR6Q5GH73 641 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 IL20RBQ6UXL0 311 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 FBXW8Q8N3Y1 598 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 CAMKVQ8NCB2 501 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 OR5T3Q8NGG3 340 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 OR13J1Q8NGT2 312 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 OR4L1Q8NH43 312 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 PPP1R14CQ8TAE6 165 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 SLC35G2Q8TBE7 412 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 CAPZA3Q96KX2 299 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 PRAP1Q96NZ9 151 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 PANX3Q96QZ0 392 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 CCL19Q99731 98 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 BAG1Q99933 345 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-236ENST00000556220 FAM173AQ9BQD7 235 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 FERMT1Q9BQL6 677 aa6.31□□□□□ -1.4
ATXN3-236ENST00000556220 EXO5Q9H790 373 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms