RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TRIM43BA6NCK2 446 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 ZAR1LA6NP61 321 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 PDZK1P1A8MUH7 402 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 LOC110117498-PIK3R3F6TDL0 507 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 J3KTA2 159 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 CCRL2O00421 344 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 PCDH17O14917 1159 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 ZW10O43264 779 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 PRAMEF10O60809 474 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 ADAP00813 363 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 EIF2S1P05198 315 aaKnown RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 RB1P06400 928 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 PIPP12273 146 aaPredicted RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 CSF2RAP15509 400 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 SYN1P17600 705 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 PTPN2P17706 415 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 ALOX12P18054 663 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 CBLP22681 906 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 CXCR2P25025 360 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 CCR2P41597 374 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 GPR1P46091 355 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 LIMS1P48059 325 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 SEPHS1P49903 392 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 MAPK12P53778 367 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 CRISP1P54107 249 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 SMIM11AP58511 58 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 WDR5P61964 334 aaKnown RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 MEF2AQ02078 507 aaPredicted RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 TAP2Q03519 686 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 EEF1A2Q05639 463 aaKnown RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 FPGSQ05932 587 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 CNTN1Q12860 1018 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 IRF3Q14653 427 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 CYP27C1Q4G0S4 372 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 TMEM215Q68D42 235 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 PLAG1Q6DJT9 500 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 CASP12Q6UXS9 341 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 CEACAM20Q6UY09 585 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 ZNF765Q7L2R6 523 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 KIAA0907Q7Z7F0 614 aaPredicted RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 DSG4Q86SJ6 1040 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 WDR36Q8NI36 951 aaKnown RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 WFIKKN2Q8TEU8 576 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 RASSF5Q8WWW0 418 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 PIK3R3Q92569 461 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 HTRA1Q92743 480 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 TCEAL4Q96EI5 215 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 COQ10AQ96MF6 247 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 SAMD11Q96NU1 681 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 QRFPRQ96P65 431 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 ZNF607Q96SK3 696 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 MGLLQ99685 303 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 NUAK2Q9H093 628 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 RACGAP1Q9H0H5 632 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 OR51E2Q9H255 320 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 LINC00597Q9H2U6 94 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 DPEP2Q9H4A9 486 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 NMNAT1Q9HAN9 279 aaPredicted RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 NEUROD4Q9HD90 331 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 A4GALTQ9NPC4 353 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 INIPQ9NRY2 104 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 MARK1Q9P0L2 795 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 ICKQ9UPZ9 632 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 SH2B3Q9UQQ2 575 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 ITM2BQ9Y287 266 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 WBP11Q9Y2W2 641 aaKnown RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 TSC22D4Q9Y3Q8 395 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 PCDHGA3Q9Y5H0 932 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 WNT6Q9Y6F9 365 aa6.67□□□□□ -1.34
TDP1-213ENST00000555880 MN1Q10571 1320 aaPredicted RBP6.67□□□□□ -1.34
TDP1-213ENST00000555880 C17orf113A0A1B0GUU1 675 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 ANKDD1BA6NHY2 528 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 M0R129 80 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 TLR4O00206 839 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 HAT1O14929 419 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 PDPK1O15530 556 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 ASNA1O43681 348 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 KIAA0513O60268 411 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 LZTS3O60299 673 aaPredicted RBP6.66□□□□□ -1.34
TDP1-213ENST00000555880 SEMA3DO95025 777 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 OXSR1O95747 527 aaPredicted RBP6.66□□□□□ -1.34
TDP1-213ENST00000555880 RPN2P04844 631 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 BCHEP06276 602 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 DDCP20711 480 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 KELP23276 732 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 CHMP24386 653 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 CNR2P34972 360 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 IRS1P35568 1242 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 PCYT1AP49585 367 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 DGKGP49619 791 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 EPHA5P54756 1037 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 MANFP55145 182 aaKnown RBP6.66□□□□□ -1.34
TDP1-213ENST00000555880 FOXD4Q12950 439 aaPredicted RBP6.66□□□□□ -1.34
TDP1-213ENST00000555880 SLC13A2Q13183 592 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 HEPACAMQ14CZ8 416 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 ZNF77Q15935 545 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 TSTQ16762 297 aaKnown RBP6.66□□□□□ -1.34
TDP1-213ENST00000555880 LRRC26Q2I0M4 334 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 MEDAGQ5VYS4 303 aa6.66□□□□□ -1.34
TDP1-213ENST00000555880 STEAP3Q658P3 488 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms