RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 PCTPQ9UKL6 214 aa17.15■□□□□ 0.34
NEDD1-208ENST00000555806 TRGV8A0A0C4DH27 118 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 ASPDHA6ND91 283 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 C17orf105B2RV13 164 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 RIPK2O43353 540 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 PRKNO60260 465 aaPredicted RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 NME2P1O60361 137 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 NME2P22392 152 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 TLX1P31314 330 aaPredicted RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 BUD31P41223 144 aaPredicted RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 SSR4P51571 173 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 GPR143P51810 404 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 NEK2P51955 445 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 TEX35Q5T0J7 233 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 TTC19Q6DKK2 380 aaPredicted RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 MAMDC2Q7Z304 686 aaPredicted RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 GPR180Q86V85 440 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 OR4N5Q8IXE1 308 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 CYP4Z2PQ8N1L4 340 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 ZCCHC7Q8N3Z6 543 aaKnown RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 MORN4Q8NDC4 146 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 WDR20Q8TBZ3 569 aa17.14■□□□□ 0.33
NEDD1-208ENST00000555806 MTFMTQ96DP5 389 aaKnown RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 NSUN5Q96P11 429 aaKnown RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 RPF2Q9H7B2 306 aaKnown RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 TRIM45Q9H8W5 580 aaPredicted RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 SEMA4BQ9NPR2 832 aaPredicted RBP17.14■□□□□ 0.33
NEDD1-208ENST00000555806 FGF17O60258 216 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 CLDN1O95832 211 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 FAM153BP0C7A2 387 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 COX7A2P14406 83 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 ARFIP1P53367 373 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 HNRNPH2P55795 449 aaKnown RBP17.13■□□□□ 0.33
NEDD1-208ENST00000555806 TNFRSF17Q02223 184 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 FAM153CQ494X1 144 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 CYP20A1Q6UW02 462 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 HSDL2Q6YN16 418 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 ZNF227Q86WZ6 799 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 C7orf57Q8NEG2 295 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 PTPMT1Q8WUK0 201 aaPredicted RBP17.13■□□□□ 0.33
NEDD1-208ENST00000555806 ANKRD9Q96BM1 317 aaPredicted RBP17.13■□□□□ 0.33
NEDD1-208ENST00000555806 MTBPQ96DY7 904 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 DGAT2Q96PD7 388 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 LIN28AQ9H9Z2 209 aaKnown RBP17.13■□□□□ 0.33
NEDD1-208ENST00000555806 LYARQ9NX58 379 aaKnown RBP17.13■□□□□ 0.33
NEDD1-208ENST00000555806 SH3BGRL2Q9UJC5 107 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 ERVK-11Q9UQG0 969 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 KLF13Q9Y2Y9 288 aaPredicted RBP17.13■□□□□ 0.33
NEDD1-208ENST00000555806 YARS2Q9Y2Z4 477 aaKnown RBP17.13■□□□□ 0.33
NEDD1-208ENST00000555806 ATG4BQ9Y4P1 393 aa17.13■□□□□ 0.33
NEDD1-208ENST00000555806 NPIPA5E9PKD4 350 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 FOXE1O00358 373 aaPredicted RBP17.12■□□□□ 0.33
NEDD1-208ENST00000555806 EEDO75530 441 aaKnown RBP17.12■□□□□ 0.33
NEDD1-208ENST00000555806 PRKRAO75569 313 aaKnown RBP17.12■□□□□ 0.33
NEDD1-208ENST00000555806 ETHE1O95571 254 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 RPS17P08708 135 aaKnown RBP17.12■□□□□ 0.33
NEDD1-208ENST00000555806 ZNF24P17028 368 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 GCAP28676 217 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 IFT88Q13099 833 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 TRAF3Q13114 568 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 CUL3Q13618 768 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 FRG2Q64ET8 278 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 C18orf63Q68DL7 685 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 ADGRD1Q6QNK2 874 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 C16orf47Q6ZP98 133 aaPredicted RBP17.12■□□□□ 0.33
NEDD1-208ENST00000555806 MILR1Q7Z6M3 343 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 NUDT13Q86X67 352 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 GSPT2Q8IYD1 628 aaKnown RBP17.12■□□□□ 0.33
NEDD1-208ENST00000555806 CPSF7Q8N684 471 aaKnown RBP17.12■□□□□ 0.33
NEDD1-208ENST00000555806 ZNF321PQ8N8H1 164 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 SLC2A12Q8TD20 617 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 ASB15Q8WXK1 588 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 TANKQ92844 425 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 GPR137Q96N19 417 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 FRG2BQ96QU4 278 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 SERPINI1Q99574 410 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 NTMT1Q9BV86 223 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 ZNF717Q9BY31 904 aaPredicted RBP17.12■□□□□ 0.33
NEDD1-208ENST00000555806 ZBTB26Q9HCK0 441 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 COPS7AQ9UBW8 275 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 NPIPA1Q9UND3 350 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 DOPEY1Q5JWR5 2465 aa17.12■□□□□ 0.33
NEDD1-208ENST00000555806 A0A0A6YYD5 115 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 IQANK1A0A1B0GTG1 560 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 A8MT66 165 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 A8MVJ9 347 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 WWP2O00308 870 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 DYRK3O43781 588 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 ZG16O60844 167 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 OR2J2O76002 312 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 WISP2O76076 250 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 BSGP35613 385 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 STT3AP46977 705 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 MEOX1P50221 254 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 CASP6P55212 293 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 PLIN5Q00G26 463 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 FOLH1Q04609 750 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.11■□□□□ 0.33
NEDD1-208ENST00000555806 KRTCAP3Q53RY4 240 aa17.11■□□□□ 0.33
NEDD1-208ENST00000555806 TIFABQ6ZNK6 161 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms