RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 OR6M1Q8NGM8 313 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 ESAMQ96AP7 390 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 RPGRIP1Q96KN7 1286 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 USP28Q96RU2 1077 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 SLC26A1Q9H2B4 701 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 HSD3B7Q9H2F3 369 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 ZNF696Q9H7X3 374 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 KCNK13Q9HB14 408 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 HOMER3Q9NSC5 361 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 NLGN3Q9NZ94 848 aa4.58□□□□□ -1.68
VRK1-205ENST00000555402 MRPS2Q9Y399 296 aaKnown RBP4.58□□□□□ -1.68
VRK1-205ENST00000555402 SRRM4A7MD48 611 aaKnown RBP4.57□□□□□ -1.68
VRK1-205ENST00000555402 NPIPB9F8W1W9 429 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 SSX5O60225 188 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 CEACAM4O75871 244 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 OR6A2O95222 327 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 IGLV1-44P01699 117 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 GHRP10912 638 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 KRT5P13647 590 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 ARF4P18085 180 aaPredicted RBP4.57□□□□□ -1.68
VRK1-205ENST00000555402 CCNA2P20248 432 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 HSPA1LP34931 641 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 ABCE1P61221 599 aaKnown RBP4.57□□□□□ -1.68
VRK1-205ENST00000555402 GCKRQ14397 625 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 TMEM187Q14656 261 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 OR1C1Q15619 314 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 WSCD2Q2TBF2 565 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 RFTN2Q52LD8 501 aaPredicted RBP4.57□□□□□ -1.68
VRK1-205ENST00000555402 GPAT3Q53EU6 434 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 NKAIN2Q5VXU1 208 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 BSPRYQ5W0U4 402 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 Q6ZRP5 223 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 CATSPERDQ86XM0 798 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 NUP37Q8NFH4 326 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 OR2T6Q8NHC8 308 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 C8orf46Q8TAG6 207 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 ZNF519Q8TB69 540 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 MRPL53Q96EL3 112 aaKnown RBP4.57□□□□□ -1.68
VRK1-205ENST00000555402 PCED1BQ96HM7 432 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 GPR137Q96N19 417 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 ZNF300Q96RE9 604 aaPredicted RBP4.57□□□□□ -1.68
VRK1-205ENST00000555402 LITAFQ99732 161 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 COQ7Q99807 217 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 SPAG8Q99932 426 aaPredicted RBP4.57□□□□□ -1.68
VRK1-205ENST00000555402 EGLN1Q9GZT9 426 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 WWP1Q9H0M0 922 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 FNDC4Q9H6D8 234 aaPredicted RBP4.57□□□□□ -1.68
VRK1-205ENST00000555402 MED20Q9H944 212 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 TEX10Q9NXF1 929 aaPredicted RBP4.57□□□□□ -1.68
VRK1-205ENST00000555402 ERVK-18Q9QC07 812 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 CACNG5Q9UF02 275 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 GAB2Q9UQC2 676 aa4.57□□□□□ -1.68
VRK1-205ENST00000555402 YJEFN3A6XGL0 299 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 TMCO5BA8MYB1 307 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 ANHXE9PGG2 379 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 CHEK1O14757 476 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 RASGRF2O14827 1237 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 INPP4BO15327 924 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 TXNL1O43396 289 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 NME2P1O60361 137 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 MTRF1O75570 445 aaKnown RBP4.56□□□□□ -1.68
VRK1-205ENST00000555402 OR6B1O95007 311 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 ANGPTL1O95841 491 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 TXNDC12O95881 172 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 TGFAP01135 160 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 SERPINF2P08697 491 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 ZNF26P17031 533 aaPredicted RBP4.56□□□□□ -1.68
VRK1-205ENST00000555402 ACP1P24666 158 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 PDHA2P29803 388 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 ALDH3B1P43353 468 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 ACADSBP45954 432 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 CYCSP99999 105 aaKnown RBP4.56□□□□□ -1.68
VRK1-205ENST00000555402 RBBP4Q09028 425 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 MSLNQ13421 630 aaPredicted RBP4.56□□□□□ -1.68
VRK1-205ENST00000555402 DRP2Q13474 957 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 KARSQ15046 597 aaKnown RBP4.56□□□□□ -1.68
VRK1-205ENST00000555402 MTHFSDQ2M296 383 aaKnown RBP4.56□□□□□ -1.68
VRK1-205ENST00000555402 ZNF730Q6ZMV8 503 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 RBM43Q6ZSC3 357 aaKnown RBP4.56□□□□□ -1.68
VRK1-205ENST00000555402 C17orf64Q86WR6 236 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 CNNM3Q8NE01 707 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 HCAR2Q8TDS4 363 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 SLCO2A1Q92959 643 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 RAB39BQ96DA2 213 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 KRT12Q99456 494 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 NACA2Q9H009 215 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 GDF3Q9NR23 364 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 VPS54Q9P1Q0 977 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 ACTR3BQ9P1U1 418 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 PLA2G4CQ9UP65 541 aa4.56□□□□□ -1.68
VRK1-205ENST00000555402 MTF2Q9Y483 593 aaPredicted RBP4.56□□□□□ -1.68
VRK1-205ENST00000555402 COL2A1P02458 1487 aaPredicted RBP4.56□□□□□ -1.68
VRK1-205ENST00000555402 SHISA7A6NL88 538 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 A8MU76 341 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 NR5A2O00482 541 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 KIAA0513O60268 411 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 CSO75390 466 aaKnown RBP4.55□□□□□ -1.68
VRK1-205ENST00000555402 SYNGR4O95473 234 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 PROS1P07225 676 aa4.55□□□□□ -1.68
VRK1-205ENST00000555402 CFC1BP0CG36 223 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms