RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ZNF468Q5VIY5 522 aaPredicted RBP11.02□□□□□ -0.65
VRK1-204ENST00000555351 MRM1Q6IN84 353 aaKnown RBP11.02□□□□□ -0.65
VRK1-204ENST00000555351 HSDL2Q6YN16 418 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 TIFABQ6ZNK6 161 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 Q6ZPB1 254 aaPredicted RBP11.02□□□□□ -0.65
VRK1-204ENST00000555351 GPR180Q86V85 440 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 SIAH3Q8IW03 269 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 TMEM156Q8N614 296 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 OR5L2Q8NGL0 311 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 WDR20Q8TBZ3 569 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 ANKRD9Q96BM1 317 aaPredicted RBP11.02□□□□□ -0.65
VRK1-204ENST00000555351 ART5Q96L15 291 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 SERPINI1Q99574 410 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 MRPL46Q9H2W6 279 aaKnown RBP11.02□□□□□ -0.65
VRK1-204ENST00000555351 OR51B5Q9H339 312 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 RPF2Q9H7B2 306 aaKnown RBP11.02□□□□□ -0.65
VRK1-204ENST00000555351 KLHL1Q9NR64 748 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 ANKRD10Q9NXR5 420 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 MYOTQ9UBF9 498 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 SUCOQ9UBS9 1254 aaKnown RBP11.02□□□□□ -0.65
VRK1-204ENST00000555351 FBXW2Q9UKT8 454 aa11.02□□□□□ -0.65
VRK1-204ENST00000555351 EXOC1LA0A1B0GW35 172 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 TMEM200CA6NKL6 621 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 C17orf105B2RV13 164 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 TRIM49D1C9J1S8 452 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 POC1B-GALNT4F8VUJ3 575 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 RTCAO00442 366 aaKnown RBP11.01□□□□□ -0.65
VRK1-204ENST00000555351 PROM1O43490 865 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 ASNA1O43681 348 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 SLC19A2O60779 497 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 SIX3O95343 332 aaPredicted RBP11.01□□□□□ -0.65
VRK1-204ENST00000555351 AGAP20933 346 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 STT3AP46977 705 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 SSR4P51571 173 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 RPS13P62277 151 aaKnown RBP11.01□□□□□ -0.65
VRK1-204ENST00000555351 PMP22Q01453 160 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 CPSF6Q16630 551 aaKnown RBP eCLIP11.01□□□□□ -0.65
VRK1-204ENST00000555351 FRG2Q64ET8 278 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 ADGRD1Q6QNK2 874 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 RPTNQ6XPR3 784 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 CLNKQ7Z7G1 428 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 MYLK4Q86YV6 388 aaPredicted RBP11.01□□□□□ -0.65
VRK1-204ENST00000555351 CYP4Z2PQ8N1L4 340 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 PTGR2Q8N8N7 351 aaPredicted RBP11.01□□□□□ -0.65
VRK1-204ENST00000555351 ZFP62Q8NB50 900 aaPredicted RBP11.01□□□□□ -0.65
VRK1-204ENST00000555351 C16orf52Q8NHV5 167 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 SGCZQ96LD1 299 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 FRG2BQ96QU4 278 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 MTERF1Q99551 399 aaKnown RBP11.01□□□□□ -0.65
VRK1-204ENST00000555351 ZNF717Q9BY31 904 aaPredicted RBP11.01□□□□□ -0.65
VRK1-204ENST00000555351 HES7Q9BYE0 225 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 TIMMDC1Q9NPL8 285 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.01□□□□□ -0.65
VRK1-204ENST00000555351 XPR1Q9UBH6 696 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 COPS7AQ9UBW8 275 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 ADAM29Q9UKF5 820 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 PCTPQ9UKL6 214 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 RNF11Q9Y3C5 154 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 ICE1Q9Y2F5 2266 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 UNC79Q9P2D8 2635 aa11.01□□□□□ -0.65
VRK1-204ENST00000555351 A0A0A6YYD5 115 aa11□□□□□ -0.65
VRK1-204ENST00000555351 A1L4Q6 167 aa11□□□□□ -0.65
VRK1-204ENST00000555351 LRRC14BA6NHZ5 514 aa11□□□□□ -0.65
VRK1-204ENST00000555351 OR7A17O14581 309 aa11□□□□□ -0.65
VRK1-204ENST00000555351 LDB3O75112 727 aa11□□□□□ -0.65
VRK1-204ENST00000555351 OTCP00480 354 aa11□□□□□ -0.65
VRK1-204ENST00000555351 RPS17P08708 135 aaKnown RBP11□□□□□ -0.65
VRK1-204ENST00000555351 ZNF24P17028 368 aa11□□□□□ -0.65
VRK1-204ENST00000555351 TNNI3P19429 210 aa11□□□□□ -0.65
VRK1-204ENST00000555351 BSGP35613 385 aa11□□□□□ -0.65
VRK1-204ENST00000555351 CCNG1P51959 295 aa11□□□□□ -0.65
VRK1-204ENST00000555351 RNF4P78317 190 aa11□□□□□ -0.65
VRK1-204ENST00000555351 PLIN5Q00G26 463 aa11□□□□□ -0.65
VRK1-204ENST00000555351 TBL3Q12788 808 aaKnown RBP11□□□□□ -0.65
VRK1-204ENST00000555351 ART3Q13508 389 aa11□□□□□ -0.65
VRK1-204ENST00000555351 DDX39BQ13838 428 aaKnown RBP11□□□□□ -0.65
VRK1-204ENST00000555351 MPEG1Q2M385 716 aa11□□□□□ -0.65
VRK1-204ENST00000555351 SPRED3Q2MJR0 410 aa11□□□□□ -0.65
VRK1-204ENST00000555351 C1QL3Q5VWW1 255 aa11□□□□□ -0.65
VRK1-204ENST00000555351 CYP20A1Q6UW02 462 aa11□□□□□ -0.65
VRK1-204ENST00000555351 RGS9BPQ6ZS82 235 aa11□□□□□ -0.65
VRK1-204ENST00000555351 PNPLA5Q7Z6Z6 429 aaPredicted RBP11□□□□□ -0.65
VRK1-204ENST00000555351 FJX1Q86VR8 437 aa11□□□□□ -0.65
VRK1-204ENST00000555351 NUDT13Q86X67 352 aa11□□□□□ -0.65
VRK1-204ENST00000555351 DND1Q8IYX4 353 aaKnown RBP11□□□□□ -0.65
VRK1-204ENST00000555351 ST13P4Q8IZP2 240 aaPredicted RBP11□□□□□ -0.65
VRK1-204ENST00000555351 EID3Q8N140 333 aa11□□□□□ -0.65
VRK1-204ENST00000555351 GHDCQ8N2G8 530 aa11□□□□□ -0.65
VRK1-204ENST00000555351 TMEM151AQ8N4L1 468 aa11□□□□□ -0.65
VRK1-204ENST00000555351 SLC15A4Q8N697 577 aa11□□□□□ -0.65
VRK1-204ENST00000555351 GOLM1Q8NBJ4 401 aa11□□□□□ -0.65
VRK1-204ENST00000555351 NUBPLQ8TB37 319 aa11□□□□□ -0.65
VRK1-204ENST00000555351 SLC2A12Q8TD20 617 aa11□□□□□ -0.65
VRK1-204ENST00000555351 ACMSDQ8TDX5 336 aa11□□□□□ -0.65
VRK1-204ENST00000555351 ATP6V1E2Q96A05 226 aa11□□□□□ -0.65
VRK1-204ENST00000555351 RBM18Q96H35 190 aaKnown RBP11□□□□□ -0.65
VRK1-204ENST00000555351 FBXL20Q96IG2 436 aa11□□□□□ -0.65
VRK1-204ENST00000555351 MAGED4Q96JG8 741 aa11□□□□□ -0.65
VRK1-204ENST00000555351 SCYL1Q96KG9 808 aa11□□□□□ -0.65
VRK1-204ENST00000555351 NOL11Q9H8H0 719 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms