RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PTCHD1Q96NR3 888 aa13.44□□□□□ -0.26
CHD8-208ENST00000555301 IP6K3Q96PC2 410 aa13.44□□□□□ -0.26
CHD8-208ENST00000555301 ZNF317Q96PQ6 595 aaPredicted RBP13.44□□□□□ -0.26
CHD8-208ENST00000555301 NPHS2Q9NP85 383 aa13.44□□□□□ -0.26
CHD8-208ENST00000555301 MYNNQ9NPC7 610 aa13.44□□□□□ -0.26
CHD8-208ENST00000555301 TEX10Q9NXF1 929 aaPredicted RBP13.44□□□□□ -0.26
CHD8-208ENST00000555301 C19orf25Q9UFG5 118 aaPredicted RBP13.44□□□□□ -0.26
CHD8-208ENST00000555301 PSME2Q9UL46 239 aa13.44□□□□□ -0.26
CHD8-208ENST00000555301 DLGAP4Q9Y2H0 992 aa13.44□□□□□ -0.26
CHD8-208ENST00000555301 PCDHA9Q9Y5H5 950 aa13.44□□□□□ -0.26
CHD8-208ENST00000555301 MRPS18BQ9Y676 258 aaKnown RBP13.44□□□□□ -0.26
CHD8-208ENST00000555301 TAF4O00268 1085 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 IL3P08700 152 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 C8orf89P0DMQ9 161 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 SDC1P18827 310 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 LSP1P33241 339 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 HNRNPFP52597 415 aaKnown RBP13.43□□□□□ -0.26
CHD8-208ENST00000555301 FOXL2P58012 376 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 GNGT1P63211 74 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 TLE3Q04726 772 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 BIKQ13323 160 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 NSDHLQ15738 373 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 UGT8Q16880 541 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 CCDC81Q6ZN84 652 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 SCUBE1Q8IWY4 988 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 LIX1Q8N485 282 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 TMEM52Q8NDY8 209 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 CDC26Q8NHZ8 85 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.43□□□□□ -0.26
CHD8-208ENST00000555301 CCDC28BQ9BUN5 200 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 C1orf50Q9BV19 199 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 EHD3Q9NZN3 535 aa13.43□□□□□ -0.26
CHD8-208ENST00000555301 EFSO43281 561 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 DDX5P17844 614 aaKnown RBP13.42□□□□□ -0.26
CHD8-208ENST00000555301 DDCP20711 480 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 TACR1P25103 407 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 OTX2P32243 289 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 IDH3AP50213 366 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 BTG2P78543 158 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 C2orf80Q0P641 193 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 STX4Q12846 297 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 SRSF6Q13247 344 aaKnown RBP13.42□□□□□ -0.26
CHD8-208ENST00000555301 SERTAD2Q14140 314 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 FAM69BQ5VUD6 431 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 FAM71E1Q6IPT2 247 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 SLC48A1Q6P1K1 146 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 TMEM205Q6UW68 189 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 DNAJB14Q8TBM8 379 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 THAP4Q8WY91 577 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 TSSK3Q96PN8 268 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 OR52B2Q96RD2 323 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 NSRP1Q9H0G5 558 aaKnown RBP13.42□□□□□ -0.26
CHD8-208ENST00000555301 TCF7L2Q9NQB0 619 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 MIEF1Q9NQG6 463 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 DCTN4Q9UJW0 460 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 MAPRE3Q9UPY8 281 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 FREM2Q5SZK8 3169 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 SPTBP11277 2137 aa13.42□□□□□ -0.26
CHD8-208ENST00000555301 CEP295Q9C0D2 2601 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 LOC102723996A0A087X1L8 192 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 IGKV3D-11A0A0A0MRZ8 115 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 A0A0G2JND7 137 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 TCRBV16S1A1N1A0A5B0 115 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 GMNCA6NCL1 334 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 OR2W5A6NFC9 320 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 GLOD5A6NK44 160 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 PEX12O00623 359 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 PGRMC2O15173 223 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 FGF17O60258 216 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 LDB3O75112 727 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 PRKRAO75569 313 aaKnown RBP13.41□□□□□ -0.26
CHD8-208ENST00000555301 GPR75O95800 540 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 G6PDP11413 515 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 WT1P19544 449 aaPredicted RBP13.41□□□□□ -0.26
CHD8-208ENST00000555301 MAOAP21397 527 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 RPL3P39023 403 aaKnown RBP13.41□□□□□ -0.26
CHD8-208ENST00000555301 ALDH9A1P49189 494 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 DIO3P55073 304 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 TMPRSS3P57727 454 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 FOLH1Q04609 750 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 ACTN3Q08043 901 aaPredicted RBP13.41□□□□□ -0.26
CHD8-208ENST00000555301 IL10RAQ13651 578 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 LSM12Q3MHD2 195 aaKnown RBP13.41□□□□□ -0.26
CHD8-208ENST00000555301 R3HCC1LQ7Z5L2 792 aaKnown RBP13.41□□□□□ -0.26
CHD8-208ENST00000555301 PPP1R32Q7Z5V6 425 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 CLNKQ7Z7G1 428 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 SAMD14Q8IZD0 417 aaPredicted RBP13.41□□□□□ -0.26
CHD8-208ENST00000555301 OR4K14Q8NGD5 310 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 RFWD2Q8NHY2 731 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 ADAMTS17Q8TE56 1095 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 TSLPQ969D9 159 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 MTERF3Q96E29 417 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 THOC1Q96FV9 657 aaKnown RBP13.41□□□□□ -0.26
CHD8-208ENST00000555301 EGLN2Q96KS0 407 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 EBF4Q9BQW3 602 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 NECTIN3Q9NQS3 549 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 KLHL14Q9P2G3 628 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 HEY2Q9UBP5 337 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 BAIAP2L1Q9UHR4 511 aa13.41□□□□□ -0.26
CHD8-208ENST00000555301 CES1P1Q9UKY3 287 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms