RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 MAP2K3P46734 347 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 LIMS1P48059 325 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 CRYBA2P53672 197 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 CRISP3P54108 245 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 DCDC1P59894 354 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 SPIBQ01892 262 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 MAB21L1Q13394 359 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 RIN1Q13671 783 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 PTGES3Q15185 160 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 SPHARQ15513 63 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 UGT8Q16880 541 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 ZMAT1Q5H9K5 638 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 LIPJQ5W064 366 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC39A5Q6ZMH5 540 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 MBOAT1Q6ZNC8 495 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 PTCHD4Q6ZW05 846 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 TSEN54Q7Z6J9 526 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 VOPP1Q96AW1 172 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 MTFMTQ96DP5 389 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 TMEM80Q96HE8 168 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 RC3H2Q9HBD1 1191 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 TIGARQ9NQ88 270 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 RBFOX1Q9NWB1 397 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 PTTG3PQ9NZH4 202 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 FZD4Q9ULV1 537 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 RUVBL1Q9Y265 456 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 SPEF1Q9Y4P9 236 aa10.22□□□□□ -0.77
MTHFD1-210ENST00000555252 A0A0B4J293 547 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 C1orf226A1L170 272 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 TMEM229AB2RXF0 380 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 CCNYL3P0C7X3 344 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 PRKAR1AP10644 381 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 COX7A2P14406 83 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 JUPP14923 745 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 LHCGRP22888 699 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 ASMTP46597 345 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC9A3P48764 834 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 CRISP1P54107 249 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 CLDN20P56880 219 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 TAGLNQ01995 201 aaKnown RBP10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 RGNQ15493 299 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 PTCHD3Q3KNS1 767 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 FRG2Q64ET8 278 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 BRAT1Q6PJG6 821 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 GDPD4Q6W3E5 623 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 SYT12Q8IV01 421 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 FAM20CQ8IXL6 584 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 TTC16Q8NEE8 873 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 SPPL2AQ8TCT8 520 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 UBASH3BQ8TF42 649 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 GEMIN6Q8WXD5 167 aaKnown RBP10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 AUTS2Q8WXX7 1259 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 RNF31Q96EP0 1072 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 FRG2BQ96QU4 278 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 CITED4Q96RK1 184 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 NIPSNAP1Q9BPW8 284 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 ZDHHC6Q9H6R6 413 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 NFKBIL1Q9UBC1 381 aaPredicted RBP10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 B4GALT6Q9UBX8 382 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 RPL36Q9Y3U8 105 aaKnown RBP10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 OBSL1O75147 1896 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 DSPPQ9NZW4 1301 aa10.21□□□□□ -0.77
MTHFD1-210ENST00000555252 KIF26AQ9ULI4 1882 aaPredicted RBP10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 TGM5O43548 720 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 TPST2O60704 377 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 EFCAB14O75071 495 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 CSO75390 466 aaKnown RBP10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 FGF19O95750 216 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 GAAP10253 952 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 HSD3B1P14060 373 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 DDX6P26196 483 aaKnown RBP eCLIP10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 HSD3B2P26439 372 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 VIPR1P32241 457 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 CTSOP43234 321 aaPredicted RBP10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 RECQLP46063 649 aaPredicted RBP10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 STK19P49842 368 aaPredicted RBP10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 PPP3R1P63098 170 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 TATDN3Q17R31 274 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 EXOC3L2Q2M3D2 409 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 LYPD8Q6UX82 237 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 RASGRP3Q8IV61 690 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 SLC30A8Q8IWU4 369 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 KLHDC8AQ8IYD2 350 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 SLC38A6Q8IZM9 456 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 HS6ST3Q8IZP7 471 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 CMTM8Q8IZV2 173 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 NANOGP1Q8N7R0 232 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 SKA2Q8WVK7 121 aaPredicted RBP10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 ASZ1Q8WWH4 475 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 CXorf40BQ96DE9 158 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 APIPQ96GX9 242 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 DIRAS2Q96HU8 199 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 VPS35Q96QK1 796 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 MIXL1Q9H2W2 232 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 ANKRA2Q9H9E1 313 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 ISYNA1Q9NPH2 558 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 SNTG1Q9NSN8 517 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 EIF3KQ9UBQ5 218 aaKnown RBP10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 VPS4AQ9UN37 437 aa10.21□□□□□ -0.78
MTHFD1-210ENST00000555252 ASB4Q9Y574 426 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms