RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 MPPED2Q15777 294 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CDHR3Q6ZTQ4 885 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 OR5H2Q8NGV7 314 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 POT1Q9NUX5 634 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 HRASLS2Q9NWW9 162 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 MGAT4CQ9UBM8 478 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 MAFBQ9Y5Q3 323 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 BCORL1Q5H9F3 1711 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 TDRD6O60522 2096 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 RAP2AP10114 183 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 GRIA2P42262 883 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CYBRD1Q53TN4 286 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PLD5Q8N7P1 536 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 RAB2BQ8WUD1 216 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 RXFP3Q9NSD7 469 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PCDH10Q9P2E7 1040 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 MANBAO00462 879 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 SGCEO43556 437 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CLDN7O95471 211 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 H6PDO95479 791 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM225BP0DP42 221 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ADRB3P13945 408 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CD79BP40259 229 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 DSC3Q14574 896 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PTPRCAPQ14761 206 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 LTC4SQ16873 150 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF542PQ5EBM4 170 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 EARS2Q5JPH6 523 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 VHLLQ6RSH7 139 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 SLC22A16Q86VW1 577 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 RDH12Q96NR8 316 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CADM1Q9BY67 442 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 DCSTAMPQ9H295 470 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 COQ10BQ9H8M1 238 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 DISP1Q96F81 1524 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ATG12O94817 140 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 SMPD1P17405 629 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 OXTRP30559 389 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 GCH1P30793 250 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 RTP1P59025 263 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 HYAL4Q2M3T9 481 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 MCATQ8IVS2 390 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 NANOS1Q8WY41 292 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CNN2Q99439 309 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 EFCAB11Q9BUY7 163 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 LRRC4CQ9HCJ2 640 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 MYBPHLA2RUH7 354 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CLIC1O00299 241 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 KCNC1P48547 511 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 HERVK_113P63132 956 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM234Q8WY98 164 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 TSNAXQ99598 290 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ERVK-6Q9BXR3 956 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 FNIP2Q9P278 1114 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 IQGAP3Q86VI3 1631 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 OR5H15A6NDH6 313 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 OR5H14A6NHG9 310 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 OR5H1A6NKK0 313 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 EIF4EP06730 217 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 GSTT2P0CG29 244 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PNMTP11086 282 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF43P17038 809 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 LASP1Q14847 261 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 CLEC4CQ8WTT0 213 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF578Q96N58 590 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PIP5K1AQ99755 562 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PTBP2Q9UKA9 531 aaKnown RBP6.63□□□□□ -1.35
SYNE2-216ENST00000555002 MT-CO2P00403 227 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 RHOP08100 348 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 ARAFP10398 606 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 TNFRSF8P28908 595 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 DGKQP52824 942 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 PRKCZQ05513 592 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 COL28A1Q2UY09 1125 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 C9orf152Q5JTZ5 239 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 OR2T27Q8NH04 317 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 GNPDA2Q8TDQ7 276 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM80Q96HE8 168 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 RAB21Q9UL25 225 aa6.63□□□□□ -1.35
SYNE2-216ENST00000555002 SDC3O75056 442 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CRTAPO75718 401 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 PSMD10O75832 226 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CD48P09326 243 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CCL5P13501 91 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 NDST2P52849 883 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 DLX2Q07687 328 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CEACAM19Q7Z692 300 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CELF5Q8N6W0 485 aaKnown RBP6.62□□□□□ -1.35
SYNE2-216ENST00000555002 CSNK1A1LQ8N752 337 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TMIEQ8NEW7 156 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 OR1S1Q8NH92 325 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 DIO2Q92813 273 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM246Q9BRR3 403 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 RNF38Q9H0F5 515 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 MS4A12Q9NXJ0 267 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 ZDBF2Q9HCK1 2354 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 NOTOA8MTQ0 251 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 HAS3O00219 553 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 DVL1O14640 695 aa6.62□□□□□ -1.35
SYNE2-216ENST00000555002 LRRTM2O43300 516 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms