RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SLC25A53Q5H9E4 307 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 NHSL2Q5HYW2 709 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 C1QTNF12Q5T7M4 302 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 LCN1P1Q5VSP4 162 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 FKBP1CQ5VVH2 108 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 PLPP4Q5VZY2 271 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 LYSMD4Q5XG99 296 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 FAM53AQ6NSI3 398 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 NOTUMQ6P988 496 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CTR9Q6PD62 1173 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 C15orf52Q6ZUT6 534 aaKnown RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 IL17RELQ6ZVW7 336 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 KIRREL3Q8IZU9 778 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 MARVELD2Q8N4S9 558 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 NHLRC2Q8NBF2 726 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 DBF4BQ8NFT6 615 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 GDAP1Q8TB36 358 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 SEPT1Q8WYJ6 367 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 SUSD6Q92537 303 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 DNASE1L2Q92874 299 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 P2RX5Q93086 422 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 TSACCQ96A04 125 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 PYCR2Q96C36 320 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 BSCL2Q96G97 398 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 VMP1Q96GC9 406 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 GDAP1L1Q96MZ0 367 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 F2RL3Q96RI0 385 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 HNRNPABQ99729 332 aaKnown RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 MAP3K3Q99759 626 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 DESI2Q9BSY9 194 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 MLPHQ9BV36 600 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 FAM49AQ9H0Q0 323 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 SDCBP2Q9H190 292 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 ACTL8Q9H568 366 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 POMKQ9H5K3 350 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 COPS7BQ9H9Q2 264 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 LMAN1LQ9HAT1 526 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 PPANQ9NQ55 473 aaKnown RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 INTS10Q9NVR2 710 aaKnown RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 PKD2L2Q9NZM6 624 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 C19orf25Q9UFG5 118 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 ARMCX3Q9UH62 379 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 ITGA11Q9UKX5 1188 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CDH7Q9ULB5 785 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 GRID1Q9ULK0 1009 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 GINS2Q9Y248 185 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 ZFP37Q9Y6Q3 630 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 PATJQ8NI35 1801 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 PTPRQQ9UMZ3 2332 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 TEX15Q9BXT5 2789 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 ADAMTS9Q9P2N4 1935 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 IL16Q14005 1332 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CLSPNQ9HAW4 1339 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 OOEPA6NGQ2 149 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 F8VVB4 439 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 F8VWA3 439 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 H0YAE9 185 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 SLC30A4O14863 429 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 FLRT2O43155 660 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 STX6O43752 255 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 SELENOFO60613 162 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 GLRA3O75311 464 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 CDK2AP2O75956 126 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 AP2A2O94973 939 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 NADKO95544 446 aaPredicted RBP1.34□□□□□ -2.19
PRPF39-208ENST00000554785 AMBPP02760 352 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 GPIP06744 558 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 HMBSP08397 361 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 HOXB7P09629 217 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 FAM157CP0CG43 387 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 CALML3P27482 149 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 ALDH4A1P30038 563 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 ATP5DP30049 168 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 SFTPDP35247 375 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 CETN2P41208 172 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 MAGEA11P43364 429 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 MYL7Q01449 175 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 YWHAHQ04917 246 aaPredicted RBP1.34□□□□□ -2.19
PRPF39-208ENST00000554785 SRSF5Q13243 272 aaKnown RBP1.34□□□□□ -2.19
PRPF39-208ENST00000554785 OPCMLQ14982 345 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 TEAD2Q15562 447 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 MEP1BQ16820 701 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF876PQ49A33 203 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 GPR33Q49SQ1 333 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 ANKRD20A4Q4UJ75 823 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 ANKRD20A8PQ5CZ79 823 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 XKR6Q5GH73 641 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 ANKRD20A2Q5SQ80 823 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 BEND3Q5T5X7 828 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 ANKRD20A1Q5TYW2 823 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 ANKRD20A3Q5VUR7 823 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 UGT3A1Q6NUS8 523 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 CASC4Q6P4E1 433 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 CYB5D1Q6P9G0 228 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 TMEM207Q6UWW9 146 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 C15orf39Q6ZRI6 1047 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 HOOK3Q86VS8 718 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 APLFQ8IW19 511 aaPredicted RBP1.34□□□□□ -2.19
PRPF39-208ENST00000554785 APCDD1Q8J025 514 aa1.34□□□□□ -2.19
PRPF39-208ENST00000554785 KLHDC1Q8N7A1 406 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms