RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 ITGA8P53708 1063 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 OR4D2P58180 307 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 DCAF7P61962 342 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 PPIAP62937 165 aaKnown RBP4.48□□□□□ -1.69
ATXN3-229ENST00000554672 ABATP80404 500 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 PRDX1Q06830 199 aaKnown RBP4.48□□□□□ -1.69
ATXN3-229ENST00000554672 SPARCL1Q14515 664 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 TMED2Q15363 201 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 PCBP2Q15366 365 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATXN3-229ENST00000554672 HSPB2Q16082 182 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 ANKRD20A2Q5SQ80 823 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 RIPPLY2Q5TAB7 128 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 ANKRD20A1Q5TYW2 823 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 ANKRD20A3Q5VUR7 823 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 KAZNQ674X7 775 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 RTL6Q6ICC9 239 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 SASS6Q6UVJ0 657 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 PRSS57Q6UWY2 283 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 WDR53Q7Z5U6 358 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-229ENST00000554672 P3H2Q8IVL5 708 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 RCOR2Q8IZ40 523 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 LRRC75A-AS1Q8N1F1 130 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 TMEM156Q8N614 296 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 HIPK4Q8NE63 616 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 OR5M9Q8NGP3 310 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 OR9A4Q8NGU2 314 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 SLC35G2Q8TBE7 412 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 SMPDL3AQ92484 453 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 RNASE6Q93091 150 aaKnown RBP4.48□□□□□ -1.69
ATXN3-229ENST00000554672 MRFAP1L1Q96HT8 127 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 SPATA13Q96N96 652 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 FOPNLQ96NB1 174 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 NAP1L5Q96NT1 182 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-229ENST00000554672 QKIQ96PU8 341 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATXN3-229ENST00000554672 SMC6Q96SB8 1091 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 ACAT2Q9BWD1 397 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 DEFB126Q9BYW3 111 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 ZNF703Q9H7S9 590 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-229ENST00000554672 DMRT3Q9NQL9 472 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 PNPLA3Q9NST1 481 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 SPATA7Q9P0W8 599 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 ADAM21Q9UKJ8 722 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 ACAD8Q9UKU7 415 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATXN3-229ENST00000554672 ANKRD12Q6UB98 2062 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 DOCK10Q96BY6 2186 aa4.48□□□□□ -1.69
ATXN3-229ENST00000554672 FN1P02751 2386 aaKnown RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 KCNE1BA0A087WTH5 132 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 IGKV1-8A0A0C4DH67 115 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 A0A0U1RQJ8 604 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 A0A1B0GVC2 190 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 FEZF1A0PJY2 475 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 CCDC162PA2VCL2 907 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 TUBAL3A6NHL2 446 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 IQCF5A8MTL0 148 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 SMTNL1A8MU46 457 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 SGK494L7N484 410 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 DVL2O14641 736 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 KPNA5O15131 536 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 CRLF1O75462 422 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 CCNDBP1O95273 360 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 IFNA2P01563 188 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 IGHG3P01860 377 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 TUBB4AP04350 444 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 TNNT1P13805 278 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 GABRA1P14867 456 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 EZRP15311 586 aaKnown RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 APEX1P27695 318 aaKnown RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 PSMB4P28070 264 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 FOXN2P32314 431 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 RPA3P35244 121 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 MECP2P51608 486 aaKnown RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 ZBED6P86452 979 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 RHAGQ02094 409 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 PLGLB1Q02325 96 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 RIN1Q13671 783 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 ARHGAP19Q14CB8 494 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 ABRAXAS2Q15018 415 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 FBXL19-AS1Q494R0 122 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 CCSMST1Q4G0I0 132 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 ANKRD20A4Q4UJ75 823 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 TMEM177Q53S58 311 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 Q5PR19 223 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 C1orf185Q5T7R7 199 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 NDUFAF5Q5TEU4 345 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 ICE2Q659A1 982 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 KCTD11Q693B1 232 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 ZNF425Q6IV72 752 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 KIAA0408Q6ZU52 694 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 MICALCLQ6ZW33 695 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 TRILQ7L0X0 811 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 SLC22A16Q86VW1 577 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 CXorf67Q86X51 503 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 KIF18BQ86Y91 864 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 SLC13A5Q86YT5 568 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 KLHDC8BQ8IXV7 354 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 CYP4Z2PQ8N1L4 340 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 CIARTQ8N365 385 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 KIF2BQ8N4N8 673 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 OR9A1PQ8NGU1 263 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms