RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 MTBPQ96DY7 904 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 SCYL1Q96KG9 808 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 MAPKAP1Q9BPZ7 522 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 MRPL57Q9BQC6 102 aaKnown RBP8.14□□□□□ -1.11
ACTN1-213ENST00000554508 NTMT1Q9BV86 223 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 PPCSQ9HAB8 311 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 DMRT3Q9NQL9 472 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF358Q9NW07 568 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 ARGLU1Q9NWB6 273 aaPredicted RBP8.14□□□□□ -1.11
ACTN1-213ENST00000554508 ANKRD10Q9NXR5 420 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 SEC14L3Q9UDX4 400 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 FBXW2Q9UKT8 454 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 PPT2Q9UMR5 302 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 YARS2Q9Y2Z4 477 aaKnown RBP8.14□□□□□ -1.11
ACTN1-213ENST00000554508 DNAJC13O75165 2243 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 FOXE1O00358 373 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 RTCAO00442 366 aaKnown RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 PLPP1O14494 284 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 NME2P1O60361 137 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 CDH16O75309 829 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 SH3BGRLO75368 114 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 ITGA10O75578 1167 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 SLC25A12O75746 678 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 UNC5CO95185 931 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 SIX3O95343 332 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 RNF224P0DH78 156 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 COX7A2P14406 83 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 KRT15P19012 456 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 TNNI3P19429 210 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 NME2P22392 152 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 CPN2P22792 545 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 MST1P26927 711 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 PPP2R1BP30154 601 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 TLX1P31314 330 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 KCNK10P57789 538 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 RPS13P62277 151 aaKnown RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 PMP22Q01453 160 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 ALDH6A1Q02252 535 aaKnown RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 SLAMF1Q13291 335 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 CUL3Q13618 768 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 DDX39BQ13838 428 aaKnown RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 CPSF6Q16630 551 aaKnown RBP eCLIP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 MAPKAPK3Q16644 382 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 C10orf62Q5T681 223 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF468Q5VIY5 522 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 TIFABQ6ZNK6 161 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 MAMDC2Q7Z304 686 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 GALNTL5Q7Z4T8 443 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 GOLGA7Q7Z5G4 137 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 CLNKQ7Z7G1 428 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 LCA5Q86VQ0 697 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 MYLK4Q86YV6 388 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 GPALPP1Q8IXQ4 340 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 ZCCHC7Q8N3Z6 543 aaKnown RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 TMEM156Q8N614 296 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 PTGR2Q8N8N7 351 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 POGLUT1Q8NBL1 392 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 OR8K3Q8NH51 312 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 WDR20Q8TBZ3 569 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 THAP3Q8WTV1 239 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 PTPMT1Q8WUK0 201 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 TANKQ92844 425 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 ZBTB9Q96C00 473 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 PHF21BQ96EK2 531 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 CSF3RQ99062 836 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 MTERF1Q99551 399 aaKnown RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 HES7Q9BYE0 225 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 OR51B5Q9H339 312 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 NOL11Q9H8H0 719 aaKnown RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 KLHL1Q9NR64 748 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 LYARQ9NX58 379 aaKnown RBP8.13□□□□□ -1.11
ACTN1-213ENST00000554508 PHF11Q9UIL8 331 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 RNF11Q9Y3C5 154 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 NINQ8N4C6 2090 aa8.13□□□□□ -1.11
ACTN1-213ENST00000554508 LRRC14BA6NHZ5 514 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 CYSRT1A8MQ03 144 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 KLRC4-KLRK1H3BQV0 150 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 GOLGA8RI6L899 631 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 SAP18O00422 153 aaKnown RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 OR7A17O14581 309 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 DYRK3O43781 588 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 LDB3O75112 727 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 BSGP35613 385 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 BUD31P41223 144 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 STT3AP46977 705 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 SSR4P51571 173 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 IGLV3-21P80748 117 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 ZRSR2Q15696 482 aaKnown RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 KRT71Q3SY84 523 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 GGTA1PQ4G0N0 100 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 BEND6Q5SZJ8 279 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 MTFR2Q6P444 385 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 CYP20A1Q6UW02 462 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 HSDL2Q6YN16 418 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 GPR180Q86V85 440 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF227Q86WZ6 799 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 TDRPQ86YL5 185 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 CYP4Z2PQ8N1L4 340 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 OR5L2Q8NGL0 311 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms