RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 BIRC2Q13490 618 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 TSTA3Q13630 321 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 GTF2H2Q13888 395 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 RCN2Q14257 317 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 KIR2DS3Q14952 304 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CFAP157Q5JU67 520 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 STPG1Q5TH74 334 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 FAM219BQ5XKK7 198 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 TTC19Q6DKK2 380 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CAPN13Q6MZZ7 669 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 GTF2H2CQ6P1K8 395 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 METTL2BQ6P1Q9 378 aaKnown RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 LCTLQ6UWM7 567 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 EFL1Q7Z2Z2 1120 aaKnown RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 GOLGA7Q7Z5G4 137 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 PIP4P1Q86T03 277 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 THOC6Q86W42 341 aaKnown RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 NAXDQ8IW45 347 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 LSMEM2Q8N112 164 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 TEX9Q8N6V9 391 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 SNX31Q8N9S9 440 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 OR2A1Q8NGT9 310 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 ZFP28Q8NHY6 868 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 RAB3IL1Q8TBN0 382 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 SETD7Q8WTS6 366 aaKnown RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 SH3KBP1Q96B97 665 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 SLC35A4Q96G79 324 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 MAGEB18Q96M61 343 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 PPM1MQ96MI6 270 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 OR2A14Q96R47 310 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 GPR87Q9BY21 358 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 C20orf27Q9GZN8 174 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 DRC3Q9H069 523 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 STN1Q9H668 368 aaKnown RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 CCDC177Q9NQR7 707 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 DNAJC11Q9NVH1 559 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 PNPOQ9NVS9 261 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 GEMIN8Q9NWZ8 242 aaKnown RBP6.02□□□□□ -1.45
SCFD1-212ENST00000554486 OPTCQ9UBM4 332 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 SLC22A14Q9Y267 594 aa6.02□□□□□ -1.45
SCFD1-212ENST00000554486 KIF26BQ2KJY2 2108 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 COL27A1Q8IZC6 1860 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 IGKV1-8A0A0C4DH67 115 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 PIPSLA2A3N6 862 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 OR5K3A6NET4 321 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 TMEM114B3SHH9 223 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 E7EQ34 232 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 KLF11O14901 512 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 FZD7O75084 574 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 SNNO75324 88 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 LYPLA1O75608 230 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 FSHBP01225 129 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 HRGP04196 525 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 NEFHP12036 1026 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CDH1P12830 882 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 UGT2B7P16662 529 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CKMT2P17540 419 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 AMD1P17707 334 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CD22P20273 847 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ACP1P24666 158 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CD1CP29017 333 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ALDH4A1P30038 563 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 PRDX3P30048 256 aaKnown RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CAPZBP47756 277 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 SLC1A6P48664 564 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 DUSP3P51452 185 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 GFERP55789 205 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ERVPABLB-1P60509 514 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ABCE1P61221 599 aaKnown RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CCL7P80098 99 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ASPHQ12797 758 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 TRAF3Q13114 568 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 NRN1LQ496H8 165 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ARL13AQ5H913 290 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 NKAIN2Q5VXU1 208 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 KIAA1614Q5VZ46 1190 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 RGS9BPQ6ZS82 235 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 TMPRSS9Q7Z410 1059 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 SYVN1Q86TM6 617 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 TRIM73Q86UV7 250 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 C17orf64Q86WR6 236 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 OOSP2Q86WS3 158 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 RAB42Q8N4Z0 105 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 Q8N9G6 341 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 FAM156AQ8NDB6 213 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 OR2L3Q8NG85 312 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 OR6C4Q8NGE1 309 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 OR52B6Q8NGF0 335 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 OR10G6Q8NH81 332 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 IL17DQ8TAD2 202 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 TRPC4APQ8TEL6 797 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 PPP4R1Q8TF05 950 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 DYDC1Q8WWB3 177 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 NAT6Q93015 286 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 NEIL2Q969S2 332 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CNDP1Q96KN2 507 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CNDP2Q96KP4 475 aaKnown RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ZNF382Q96SR6 550 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms