RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 EXOC1LA0A1B0GW35 172 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 A8MUA0 341 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 TRIM49D1C9J1S8 452 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 POC1B-GALNT4F8VUJ3 575 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 FOXE1O00358 373 aaPredicted RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 PLPP1O14494 284 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 NME2P1O60361 137 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 SMIM24O75264 130 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 SLC25A12O75746 678 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 SIX3O95343 332 aaPredicted RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 CLDN9O95484 217 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 SP1P08047 785 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 NME2P22392 152 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 RAP1GDS1P52306 607 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 IGLV3-21P80748 117 aaPredicted RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 STX4Q12846 297 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 GGTA1PQ4G0N0 100 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 SPINK14Q6IE38 97 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 OR4C11Q6IEV9 310 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 SLC25A25Q6KCM7 469 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 GFRALQ6UXV0 394 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 TIFABQ6ZNK6 161 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 MAMDC2Q7Z304 686 aaPredicted RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 MYLK4Q86YV6 388 aaPredicted RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 PTGR2Q8N8N7 351 aaPredicted RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 EIF1ADQ8N9N8 165 aaKnown RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 MORN4Q8NDC4 146 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 OR8K3Q8NH51 312 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 OR14A16Q8NHC5 309 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 WDR20Q8TBZ3 569 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 THAP3Q8WTV1 239 aaPredicted RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 FRMD6Q96NE9 622 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 MAPKAP1Q9BPZ7 522 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 MRPL57Q9BQC6 102 aaKnown RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 NTMT1Q9BV86 223 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 MRPL46Q9H2W6 279 aaKnown RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 OR51B5Q9H339 312 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 PNO1Q9NRX1 252 aaKnown RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF358Q9NW07 568 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 ANKRD10Q9NXR5 420 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 XPR1Q9UBH6 696 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 SEC14L3Q9UDX4 400 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 PHF11Q9UIL8 331 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF223Q9UK11 482 aaPredicted RBP9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 PCTPQ9UKL6 214 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 NFU1Q9UMS0 254 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 OSGIN2Q9Y236 505 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 CLCA3PQ9Y6N3 262 aa9.7□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZFHX3Q15911 3703 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 LRRC14BA6NHZ5 514 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 RTCAO00442 366 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 OR7A17O14581 309 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 LRRTM2O43300 516 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZFAND5O76080 213 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 SEMA3DO95025 777 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 IFNA16P05015 189 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 RPS17P08708 135 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 COX7A2P14406 83 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 CPN2P22792 545 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 MST1P26927 711 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 PPP2R1BP30154 601 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 TNFRSF17Q02223 184 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 RBPJQ06330 500 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 DDX39BQ13838 428 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 CPSF6Q16630 551 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 KRTCAP3Q53RY4 240 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 CROCCQ5TZA2 2017 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF468Q5VIY5 522 aaPredicted RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 MRM1Q6IN84 353 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 GALNTL5Q7Z4T8 443 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 CLNKQ7Z7G1 428 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF227Q86WZ6 799 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 GPALPP1Q8IXQ4 340 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF511Q8NB15 262 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 POGLUT1Q8NBL1 392 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 MYRIPQ8NFW9 859 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 PTPMT1Q8WUK0 201 aaPredicted RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 TANKQ92844 425 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 NCLNQ969V3 563 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 RELTQ969Z4 430 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 TMEM125Q96AQ2 219 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 SCYL1Q96KG9 808 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 PCNX1Q96RV3 2341 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 MTERF1Q99551 399 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 C1QTNF3Q9BXJ4 246 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 ZNF717Q9BY31 904 aaPredicted RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 HES7Q9BYE0 225 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 ALOXE3Q9BYJ1 711 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 RPF2Q9H7B2 306 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 NOL11Q9H8H0 719 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 DDX31Q9H8H2 851 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 PRM3Q9NNZ6 103 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 KLHL1Q9NR64 748 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 LYARQ9NX58 379 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 FBXW2Q9UKT8 454 aa9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 KLF13Q9Y2Y9 288 aaPredicted RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 YARS2Q9Y2Z4 477 aaKnown RBP9.69□□□□□ -0.86
PTCD2P1-201ENST00000554393 CSMD1Q96PZ7 3565 aa9.68□□□□□ -0.86
PTCD2P1-201ENST00000554393 A0A0A6YYD5 115 aa9.68□□□□□ -0.86
PTCD2P1-201ENST00000554393 SAP18O00422 153 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms